Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2941 ATGGCAAGTCAAAGTGGTGCGTCTCGAAGGAGCATAACGTCTGTTAGAAAATCCATTGATCATGGAGCTTCTCAATCTAATGCTCGAAAGTCTCTTTCTTCTTCGCGTCCCTTGGGACTGACGGCAGAGCGGACAGTAAAATCATTGCGTCTTTCAAAGGCTCTAACAGTACCTGAAACAACAACCATCTATGAAGCTTGTCGTCGCATGGCTGCTCGCAGATTAGATGCTATATTACTCACTGATTCAAATGCTTTGCTCTGTGGGATCCTTACAGACAAGGACATAACAAAAAGAGCTATTGCCTCAGAGCTTAGTCTTGAAGACACACCTGTTTCTAAGATTATGACAAAGAATCCAGTATTTGTCCTTTCTGAAACTCTTGCAGTGGAAGCCCTCCAAAAGATGGTGCAAGGCAAATTCAGACATTTACCTGTGGTGGACAATGGAGAAGTTGTTGCCATACTTGATATAGCAAAGTGCTTGTATGATGCTATTGCTCGTATGGAACGGGCAGCTGAGAAAGGAAAAGCAATTGCAGCAGCTGTTGAGGGTGTTGAAAAACAATGGGGATCATCTACTGCGGTCAATTCAACATTCATTGAGACTATTCGGGAACAGATATTTAAGCCATCATTGTCTACGATCATTCCTGAGAATTTAAAGGTTGTAACAGTTTCACCAACAGATTCTGTTTTGACAACTACGAAGAAGATGGTTGAACTTCATTCAAGTTCTGCTGTTGTGACAGTTGATGGCAAACCTCGCGGCATCCTTACTTCCAAGGATATATTGATGCGGGTAGTTGCGCAAAATCTTCCTCCAGTTTCAACTCCTGTTGAGAAGGTGATGACTCCTAATCCAGAATGTGCAGTTATTGATACACCAATAGTAGATGCACTTCACACTATGCATGATGGGAAATTTTTGCATCTTCCTGTGGTTGATAGAGATGGTGGGGTAGTTGCGGTGGTTGATGTGATTCATGTCACGCATGCTGCTGTTGCAACAGCAAGTCAGGTTGGAAACAATGAAGCTGCCAGCACCATGATGCAAAGATTCTGGGATTCGGCCATGGCCTTGACTCAAAATGATGATGATGACGAAACACGAAGTGACAGTTCCTTGAAATTTGCTTCAGAAGGAGGGGAAACTGGGAGATCCCTCACTTATCTTGCAGCAGGAATGCCAAATATATTTTCATTCAAAATACAAGATAGGAAGGGCAGAATGCATAGATTCACATGTGATACACGGAGCATGACAGAGGTTATAACTTCAATCCTTCAGAGACTTGGTGATGATATTGACCCCAATAATCTACCCCAAATTCTGTATGAAGACGAAGATCATGATAAAGTCATATTGGCTTCAGACAGTGATCTTGCAGCAGCTGTAGACCATGCAAGGACAACTGGCATGAAGGGATTGAGATTGTACTTAGACTACTCTGGAACCGGAACCGGAACAGGAACAGGAACAGAAAAACGCATTCATGGGAGAGGTTCTGGTTCAGGGAGTTTGGATCATGCTACTAAAGATGCATGGGCCTCAGCATACAGTACCTATGCTGCTGGAGCTGCACTTGTTGCAGGCTTAGGCATATTAACATACTTGAAGCGAGTTTGA 1629 0.4328 MASQSGASRRSITSVRKSIDHGASQSNARKSLSSSRPLGLTAERTVKSLRLSKALTVPETTTIYEACRRMAARRLDAILLTDSNALLCGILTDKDITKRAIASELSLEDTPVSKIMTKNPVFVLSETLAVEALQKMVQGKFRHLPVVDNGEVVAILDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKQWGSSTAVNSTFIETIREQIFKPSLSTIIPENLKVVTVSPTDSVLTTTKKMVELHSSSAVVTVDGKPRGILTSKDILMRVVAQNLPPVSTPVEKVMTPNPECAVIDTPIVDALHTMHDGKFLHLPVVDRDGGVVAVVDVIHVTHAAVATASQVGNNEAASTMMQRFWDSAMALTQNDDDDETRSDSSLKFASEGGETGRSLTYLAAGMPNIFSFKIQDRKGRMHRFTCDTRSMTEVITSILQRLGDDIDPNNLPQILYEDEDHDKVILASDSDLAAAVDHARTTGMKGLRLYLDYSGTGTGTGTGTEKRIHGRGSGSGSLDHATKDAWASAYSTYAAGAALVAGLGILTYLKRV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2941 542 CDD CBS_pair_MUG70_1 51 167 - -
Ahy18g2941 542 SUPERFAMILY CBS-domain pair 45 159 IPR046342 -
Ahy18g2941 542 PANTHER CBS/OCTICOSAPEPTIDE/PHOX/BEMP1 (PB1) DOMAIN PROTEIN 22 528 - -
Ahy18g2941 542 Pfam PB1 domain 400 482 IPR000270 GO:0005515
Ahy18g2941 542 SUPERFAMILY CBS-domain pair 222 334 IPR046342 -
Ahy18g2941 542 SMART PB1_new 399 484 IPR000270 GO:0005515
Ahy18g2941 542 ProSiteProfiles PB1 domain profile. 397 484 IPR000270 GO:0005515
Ahy18g2941 542 SUPERFAMILY CAD & PB1 domains 394 486 - -
Ahy18g2941 542 ProSiteProfiles CBS domain profile. 284 341 IPR000644 -
Ahy18g2941 542 MobiDBLite consensus disorder prediction 1 37 - -
Ahy18g2941 542 ProSiteProfiles CBS domain profile. 116 174 IPR000644 -
Ahy18g2941 542 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 22 528 - -
Ahy18g2941 542 Gene3D - 20 181 IPR046342 -
Ahy18g2941 542 ProSiteProfiles CBS domain profile. 216 276 IPR000644 -
Ahy18g2941 542 SMART cbs_1 53 101 IPR000644 -
Ahy18g2941 542 SMART cbs_1 287 332 IPR000644 -
Ahy18g2941 542 SMART cbs_1 222 269 IPR000644 -
Ahy18g2941 542 SMART cbs_1 119 163 IPR000644 -
Ahy18g2941 542 ProSiteProfiles CBS domain profile. 50 107 IPR000644 -
Ahy18g2941 542 Gene3D - 212 339 IPR046342 -
Ahy18g2941 542 Pfam CBS domain 112 156 IPR000644 -
Ahy18g2941 542 Pfam CBS domain 52 98 IPR000644 -
Ahy18g2941 542 Pfam CBS domain 222 267 IPR000644 -
Ahy18g2941 542 Pfam CBS domain 280 330 IPR000644 -
Ahy18g2941 542 CDD PB1_MUG70 400 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2941 Ahy-Chr18 134458149 134464201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2941 - - gmx:100785816 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2941 18 134458149 134464201 Ahy8g2697 8 50426966 50432964 hybridization
Ahy18g2941 18 134458149 134464201 Ahy13g2893 13 115734069 115737838 PCT
Ahy18g2941 18 134458149 134464201 Ahy3g2550 3 113064207 113067943 PCT