Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy18g2809 | ATGAAGAGCAGACGCTCCTCCTCCACCGCCTCCAGAAAATCCGAGAACGGCGGAACCTCCTCCAAACCTCCGTCTCCACCTCCGCCGCAACCGGGGGATGGTGGAGAAAGGACGGTTAAGAAGTTGCGGTTGTCGAAGGCGCTGACGATTCCCGATGGGACAACTGTCTACGACGCCTGCCGGAGAATGGCAGCCCGCCGCGTTAACGCCGTCTTGCTCACTGATTCCAATGCTCTCCTCTCCGGAATTCTCACTGACAAGGATGTGGCTAGTAGAGTTATTGCGGAGGGGCTGGTGCCAGAGCAAACACCGGTCTCCAAAGTTATGACACGCACTCCTATATTTGTCACTTCTGATACACTCGCCATCGAAGCTCTTCAGAAGATGGTCCAAGGTAAATTCAGGCACTTGCCTGTTGTGGAAAATGGTGAAGTCATTGCCATGCTGGATATCACCAAATGTCTATACGATGCCATATCTAGGATGGAGAAGGCAGCTCAGCAAGGGAGTGCCATTGCAGCTGCAGTTGAGGGGGTGGAGTTGCAAAGGGGTAGTAATGGATCTGCTGCAAGTGCTTTCATAGAAACATTGAGGGAGCGCATGTTTAAGCCTTCCTTGTCAACTATAGTTGGTGAAAATTCAAAGGTTGCTATTGTATCATCATCAGATCCTGTCCAAGTAGCTGCAAAAAAGATGCGGGAGTTGCGTGTCAATTCAGCTGTGATTGCAAATGAAACCAAGCTTCAAGGGATACTTACTTCCAAGGACATCCTTATGCGTGTTGTGGCTCAAAATCTTGCTCCTGACACCACTCCAGTAGAAAAGGTAATGACTTCAAACCCTGAACATGCATCATTAGAGACAACAATTCTTGATGCACTCCATATGATGCATGATGGGAAGTTCTTACATCTTCCAGTGGTGGACAAAGACGGCAACATTGCTGCTTGTTTGGATGTTTTGCAAATAACAACTGCTGCAATTTCTCTGGTTGAAAGTAGCTCTGGAACTGTAAATGATATGGCAAACTCAATTATGCAAAAATTTTGGGACTCAGCTTTAGCGCTAGAGCCACCAGATGATTATGACACTCAGAGTGAAGTTTCCGGGATAATGAATTCAGATGGAGCAGATACTGCAAAGTCTACATACCAAACTGTAGGTCATGGAAATTCATTTACTTTTAAATTTGAGGATCCTAATGGTCGAGTGCATCGAGTCACCTGTGGAGCGGAAAATCTAGATGAGCTTGTATCTGCTATCATGGAAAGGGTCAGTAATAATGACAGATCACGCCCCGTAATTTTGTATGATGACGATGAAGGTGATAAAATTGTTATTGCAAACGATAGTGATCTCGTTTCTGCTGTCAGCTATGCTCGATCTGCAGGACTGAAGGCCTTGAAGTTGGATTTGGAGTTTACAGATTCAGCTAAACCCGTGACACCACAGTCTGCAATAGCCATGACCACAACCACAGCTACGAGACGGAAAACAGAAGGCGGCATGTTGTCCATTCGCTCGAGTATTTTTGCAGGTGCTGTTGTTCTAACGAGCATTGGCGTGGTGGCTTACTTGAAGCGCTCAAATCAGTGA | 1596 | 0.4655 | MKSRRSSSTASRKSENGGTSSKPPSPPPPQPGDGGERTVKKLRLSKALTIPDGTTVYDACRRMAARRVNAVLLTDSNALLSGILTDKDVASRVIAEGLVPEQTPVSKVMTRTPIFVTSDTLAIEALQKMVQGKFRHLPVVENGEVIAMLDITKCLYDAISRMEKAAQQGSAIAAAVEGVELQRGSNGSAASAFIETLRERMFKPSLSTIVGENSKVAIVSSSDPVQVAAKKMRELRVNSAVIANETKLQGILTSKDILMRVVAQNLAPDTTPVEKVMTSNPEHASLETTILDALHMMHDGKFLHLPVVDKDGNIAACLDVLQITTAAISLVESSSGTVNDMANSIMQKFWDSALALEPPDDYDTQSEVSGIMNSDGADTAKSTYQTVGHGNSFTFKFEDPNGRVHRVTCGAENLDELVSAIMERVSNNDRSRPVILYDDDEGDKIVIANDSDLVSAVSYARSAGLKALKLDLEFTDSAKPVTPQSAIAMTTTTATRRKTEGGMLSIRSSIFAGAVVLTSIGVVAYLKRSNQ* | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy18g2809 | 531 | Pfam | CBS domain | 273 | 314 | IPR000644 | - | |
| Ahy18g2809 | 531 | Pfam | CBS domain | 105 | 150 | IPR000644 | - | |
| Ahy18g2809 | 531 | Pfam | CBS domain | 45 | 92 | IPR000644 | - | |
| Ahy18g2809 | 531 | Pfam | CBS domain | 213 | 260 | IPR000644 | - | |
| Ahy18g2809 | 531 | SMART | cbs_1 | 215 | 262 | IPR000644 | - | |
| Ahy18g2809 | 531 | SMART | cbs_1 | 112 | 156 | IPR000644 | - | |
| Ahy18g2809 | 531 | SMART | cbs_1 | 280 | 328 | IPR000644 | - | |
| Ahy18g2809 | 531 | SMART | cbs_1 | 46 | 94 | IPR000644 | - | |
| Ahy18g2809 | 531 | PANTHER | CBS/OCTICOSAPEPTIDE/PHOX/BEMP1 (PB1) DOMAIN PROTEIN | 27 | 518 | - | - | |
| Ahy18g2809 | 531 | Pfam | PB1 domain | 393 | 471 | IPR000270 | GO:0005515 | |
| Ahy18g2809 | 531 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 27 | 518 | - | - | |
| Ahy18g2809 | 531 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Ahy18g2809 | 531 | SMART | PB1_new | 392 | 475 | IPR000270 | GO:0005515 | |
| Ahy18g2809 | 531 | ProSiteProfiles | CBS domain profile. | 212 | 270 | IPR000644 | - | |
| Ahy18g2809 | 531 | Gene3D | - | 203 | 348 | IPR046342 | - | |
| Ahy18g2809 | 531 | SUPERFAMILY | CBS-domain pair | 36 | 154 | IPR046342 | - | |
| Ahy18g2809 | 531 | ProSiteProfiles | PB1 domain profile. | 390 | 475 | IPR000270 | GO:0005515 | |
| Ahy18g2809 | 531 | CDD | CBS_pair_MUG70_2 | 213 | 329 | - | - | |
| Ahy18g2809 | 531 | ProSiteProfiles | CBS domain profile. | 277 | 333 | IPR000644 | - | |
| Ahy18g2809 | 531 | ProSiteProfiles | CBS domain profile. | 43 | 101 | IPR000644 | - | |
| Ahy18g2809 | 531 | CDD | CBS_pair_MUG70_1 | 44 | 160 | - | - | |
| Ahy18g2809 | 531 | ProSiteProfiles | CBS domain profile. | 109 | 164 | IPR000644 | - | |
| Ahy18g2809 | 531 | Gene3D | - | 32 | 174 | IPR046342 | - | |
| Ahy18g2809 | 531 | SUPERFAMILY | CBS-domain pair | 214 | 325 | IPR046342 | - | |
| Ahy18g2809 | 531 | SUPERFAMILY | CAD & PB1 domains | 382 | 474 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy18g2809 | Ahy-Chr18 | 132360942 | 132367512 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy18g2809 | - | - | gmx:100796573 | 730.709 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy18g2809 | 18 | 132360942 | 132367512 | Ahy18g2809 | 18 | 132360942 | 132367512 | ECH | |
| Ahy18g2809 | 18 | 132360942 | 132367512 | Ahy8g2525 | 8 | 48104583 | 48111201 | hybridization | |
| Ahy13g2893 | 13 | 115734069 | 115737838 | Ahy18g2809 | 18 | 132360942 | 132367512 | PCT | |
| Ahy3g2550 | 3 | 113064207 | 113067943 | Ahy18g2809 | 18 | 132360942 | 132367512 | PCT |