Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0526 ATGGAAGAAGCTCCACAAAGGTATGCAGTTGTGACTGGAGCAAACAAAGGAATTGGATTGGAGGTAGTAAGGCAATTGGCTTCAAATGGAGTGAAGGTTGTGTTGACTTCAAGAGATGAGAAGAGAGGCCTTCATGCTTTGGAAACCCTCAAAGATCTCTCTGATTTTGTGTTCTTTCACCAGCTTGATGTTGCTGATCCTGCAAGTGTTGCTTCTCTTGCAGATTTCATCAAATCCAAATTTGGCAAACTTGATATTCTGGTTAACAACGCAGGGATTAGTGGAGTTGTAATTACAGACAACGATTTAATCGTTTCAGTAATATTGACACCCCAGGATTTATCTGAAGAAGAACTAGAAAAAGCAAGGATTGAAACATATGAATTAGGCGAAGAATGTTTGCAAATAAATTATTACGGTTCTAAAAGAACCACTGAATCTCTTCTTCCCCTCCTCCAGCTATCTGATTCACCAACAATTGTGAACGTGTCATCTTCTTTGGGAATATTAGAGCGTATATCAAACAAATGGGGCAAAGGGGTGTTAAGTGATGTCGAAAACCTTACTGTAGAGAGAGTGGATGTGGTGTTAAAGGAGTTTATGAAAGATTTCAAAGAAGGGTCATTAAAAGACAAAGGCTGGCCTGCGGTTTTTGGTGCCTACACTCTGTCCAAAGCTGCTATGAATGCCTATACAAGAATTCTTGCCAAAATGTTGCCTACTTTTTGCGTCAATTGTCTTTGTCCTGGTTATATTAAGACTGATATCACTGCAAATACTGGCTTTTATACGGTGGAAGAAGGTGCTGCTAATGTTGTGAGATTAGCATTACTTCCAAATGGTAGTCCTTCTGGTCTTTTTTATAACAGGAGTGAAGTGCATTCCTATTAA 891 0.3928 MEEAPQRYAVVTGANKGIGLEVVRQLASNGVKVVLTSRDEKRGLHALETLKDLSDFVFFHQLDVADPASVASLADFIKSKFGKLDILVNNAGISGVVITDNDLIVSVILTPQDLSEEELEKARIETYELGEECLQINYYGSKRTTESLLPLLQLSDSPTIVNVSSSLGILERISNKWGKGVLSDVENLTVERVDVVLKEFMKDFKEGSLKDKGWPAVFGAYTLSKAAMNAYTRILAKMLPTFCVNCLCPGYIKTDITANTGFYTVEEGAANVVRLALLPNGSPSGLFYNRSEVHSY* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0526 296 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Ahy2g0526 296 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 166 IPR002347 -
Ahy2g0526 296 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 221 240 IPR002347 -
Ahy2g0526 296 Gene3D - 2 296 - -
Ahy2g0526 296 Pfam short chain dehydrogenase 8 169 IPR002347 -
Ahy2g0526 296 PANTHER SALUTARIDINE REDUCTASE-LIKE 1 295 - -
Ahy2g0526 296 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 295 - -
Ahy2g0526 296 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 282 IPR036291 -
Ahy2g0526 296 PRINTS Glucose/ribitol dehydrogenase family signature 221 240 IPR002347 -
Ahy2g0526 296 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Ahy2g0526 296 PRINTS Glucose/ribitol dehydrogenase family signature 240 257 IPR002347 -
Ahy2g0526 296 PRINTS Glucose/ribitol dehydrogenase family signature 152 168 IPR002347 -
Ahy2g0526 296 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0526 Ahy-Chr2 7506603 7530316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0526 3 257 Acyl Lipid Metabolism Gene Families AT1G63380 26.792 3.92e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0526 K15095 - gmx:100801677 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0017 12 984155 986654 Ahy2g0526 2 7506603 7530316 hybridization
Ahy14g2380 14 126608166 126621413 Ahy2g0526 2 7506603 7530316 PCT
Ahy4g2098 4 114893158 114922991 Ahy2g0526 2 7506603 7530316 PCT