Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0017 ATGGTTTCAGCGGCAGATTCCATACAAAGGTATGCAGTAGTTACAGGTTCAAACAAAGGGATAGGGTTGGAAACTGTTAAAGGGTTGGCATCGAATGGTGTGAAGGTTGTTCTGACAGCAAGAGATGAGAAAAGGGGATATGAAGCTGTTGAGAAATTGAGGAGAGAGTGTGGTTTCTCTAACGAACTTGTGATCTTTCACCAGCTTGATGTAACTGATTCTTCTAGCATTGCATCATTGGTGAAATTTGTGAAATTCCAATTTGGAAGACTTGATATCTTGGTGAACAATGCAGGAATCAATGGTTTCGATTCAGCTGATCTTATAGGATCAATAATTAAGTGGAAAGAGCTTAATCAAACTTATGATATGGCTGAAAAATGCTTAACAACAAACTACTATGGTGCTAAAGAAACAACTGAGGCATTTCTTCCTTTGCTTCAGTTATCCACTTCACCTATGATTGTCAATGTTTCTTCCACAGCAGGGTTGTTACAGCACATATCAAATGAATGGGCTAAAGGGGTGCTAGATGACACCGAAAACCTCACAGAAGATCTAATAGACAAGGTACTAAGGGAGTTCATGAAAGATTTCAAAGAAGGTTCATTGAAAACCAAAGGCTGGCCAACCTATCTGTCTGCATATATGCTCTCAAAAGCAGCCATGAATTCTTACACAAGGCTTCTGGCACGGAAGCATCCGAAATTCTGTGTTAATTGTGTCTGTCCAGGTTTTGTAAAAACGGACATTAACCGAAATACCGGAATCTTATCGGTTGAAAATGGTGCTGCTAGTGTTGTTAGATTAGCATTGTTGCCTAGTGGTTCACCTTCTGGCTACTTCTTTGCTATGCAAGAATTGTCAAGCTTTTGA 876 0.3973 MVSAADSIQRYAVVTGSNKGIGLETVKGLASNGVKVVLTARDEKRGYEAVEKLRRECGFSNELVIFHQLDVTDSSSIASLVKFVKFQFGRLDILVNNAGINGFDSADLIGSIIKWKELNQTYDMAEKCLTTNYYGAKETTEAFLPLLQLSTSPMIVNVSSTAGLLQHISNEWAKGVLDDTENLTEDLIDKVLREFMKDFKEGSLKTKGWPTYLSAYMLSKAAMNSYTRLLARKHPKFCVNCVCPGFVKTDINRNTGILSVENGAASVVRLALLPSGSPSGYFFAMQELSSF* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0017 291 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 6 291 - -
Ahy12g0017 291 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 277 IPR036291 -
Ahy12g0017 291 CDD carb_red_PTCR-like_SDR_c 10 283 IPR045313 GO:0016616
Ahy12g0017 291 Gene3D - 5 291 - -
Ahy12g0017 291 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 IPR002347 -
Ahy12g0017 291 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 161 IPR002347 -
Ahy12g0017 291 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 216 235 IPR002347 -
Ahy12g0017 291 PRINTS Glucose/ribitol dehydrogenase family signature 89 100 IPR002347 -
Ahy12g0017 291 PRINTS Glucose/ribitol dehydrogenase family signature 147 163 IPR002347 -
Ahy12g0017 291 PRINTS Glucose/ribitol dehydrogenase family signature 235 252 IPR002347 -
Ahy12g0017 291 PRINTS Glucose/ribitol dehydrogenase family signature 11 28 IPR002347 -
Ahy12g0017 291 PRINTS Glucose/ribitol dehydrogenase family signature 216 235 IPR002347 -
Ahy12g0017 291 Pfam Enoyl-(Acyl carrier protein) reductase 206 255 - -
Ahy12g0017 291 Pfam short chain dehydrogenase 11 166 IPR002347 -
Ahy12g0017 291 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 6 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0017 Ahy-Chr12 984155 986654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0017 13 256 Acyl Lipid Metabolism Gene Families AT1G24360 22.267 2.63e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0017 K15095 - gmx:111064653 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0017 12 984155 986654 Ahy12g0017 12 984155 986654 ECH
Ahy12g0017 12 984155 986654 Ahy2g0526 2 7506603 7530316 hybridization
Ahy14g2380 14 126608166 126621413 Ahy12g0017 12 984155 986654 PCT
Ahy4g2098 4 114893158 114922991 Ahy12g0017 12 984155 986654 PCT