Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2404 ATGCGCCGCCGAGCTGCCGCCGAGTTCCGGCGCCGTGTTCGGCGGAGGTTTTCTTATTGGATCTGGTTTCTCCTCGCCGCCTTCTCTCTTGCGGCTTTGCTTTTGTTCGTAGTGCAGCACAATCATCGCCAAGATCAGTTTCAGCTTCCGCTAACGGAGAGGAATGCCAGAGGTGAACTTGCAAAAGAGAGTATGAATTTTTCCAATGAAATTTTAAGTGCAACTTCCTTTTCACGACAGATAGCAGAGCAAATGGTTCTGGCCAAGGCATATGTGGTCATTGCCAAAGCACACAATAATCATCATTTTGCCTGGCAGCTTAGTTCAAAGATTAGAATTTGCCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGGGAGCCCATTACCTTGGACGAAGCTGAGCCAATTATTAAAAGCCTCTCTTCCCTGATTTTCAAGGCACAAGATGTCCATTATGACATTGCTACCACTATAGTAACAATGAAGTCGCACATTCAAGCTCTCGAAGAACGTGCTAATGTTGTAACAGTTCAAAGCACAGTGTTTGCTCAAATATCAGCCGAAGCACTGCCAAAGAGTCTTCATTGCCTAAATGTGAAACTTATGACCGATTGGCTAAGGACATTGTCCCTGCAAAAACTCTCAAACGAGTGGAAAACTTCTCGTCTCAAGGACAACAGTTTATATCATTTCTGCATTTTTTCAGATAATGTGCTTGCAACATCAGTTGTTGTTAACTCTACAGTTGTCAATGCAGACCACCCAAAACAATTGATCTTTCACATTGTCACCAATGGTGTCAATTATGGAGCAATGCAAGCATGGTTCCTTAGTAATGACTTTAAAGGGGCCATCATAGAGGTGCAGAATTTTGAGGACTTTCATTGGTTGAATGAAAATTATTCTCCGATTATCAAACAGCTACACAATCCAGAATCTCAAGCCTTCTATTTTGGAGCTTATCAAGATGTGAATATCGAATCAAAAGTTCGGAACCCCAAGTATTTGTCTGTACTTAATCATCTTCGGTTTTACATCCCTGAGATTTATCCACAACTTGAGAAGGTTGTTTTCCTTGACGATGATGTTGTCGTCCAGAAGGACCTCACCATACTTTTCTCGCTGGATTTGCATGGAAATGTGAATGGTGCAGTTGAAACTTGTCTTGAAGCGTTTCACCGGTACTACAAGTATCTAAACTTCTCAAATTCAATTATAAGCTCAAAGTTCGATCCACAGGCATGTGGATGGGCATTTGGCATGAACATTTTTGACTTGGTTGCATGGAGGAAAGCAGATGTGACAGCAAGATATCACTATTGGCTGGAGCAAAATGCCAATGGCACACTCTGGAAGCTTGGCATGCTTCCTCCAGCTCTTCTAAGTTTCTATGGTTTGACAGAACCACTTGATAGAAGATGGCATGTTTTAGGATTGGGTTATGACTTAAATATTGACAACCGTCTAATTGAAAGCGCTGCAGTTATCCACTTCAATGGGAACATGAAGCCATGGCTGAAGTTAGCTATAGGCAGGTATAAGCCACTGTGGCACAGGTACATAAATCAAAGTCACCCTCACCTTCTAGATTGTGCCAGTAGTTAA 1605 0.4237 MRRRAAAEFRRRVRRRFSYWIWFLLAAFSLAALLLFVVQHNHRQDQFQLPLTERNARGELAKESMNFSNEILSATSFSRQIAEQMVLAKAYVVIAKAHNNHHFAWQLSSKIRICQLLLSKAAMTGEPITLDEAEPIIKSLSSLIFKAQDVHYDIATTIVTMKSHIQALEERANVVTVQSTVFAQISAEALPKSLHCLNVKLMTDWLRTLSLQKLSNEWKTSRLKDNSLYHFCIFSDNVLATSVVVNSTVVNADHPKQLIFHIVTNGVNYGAMQAWFLSNDFKGAIIEVQNFEDFHWLNENYSPIIKQLHNPESQAFYFGAYQDVNIESKVRNPKYLSVLNHLRFYIPEIYPQLEKVVFLDDDVVVQKDLTILFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSKFDPQACGWAFGMNIFDLVAWRKADVTARYHYWLEQNANGTLWKLGMLPPALLSFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWHRYINQSHPHLLDCASS* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2404 534 Pfam Glycosyl transferase family 8 233 508 IPR002495 GO:0016757
Ahy20g2404 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 529 IPR029044 -
Ahy20g2404 534 CDD GT8_like_1 229 522 - -
Ahy20g2404 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 5 534 IPR029993 GO:0047262
Ahy20g2404 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 531 IPR029044 -
Ahy20g2404 534 PANTHER HEXOSYLTRANSFERASE 5 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2404 Ahy-Chr20 128857416 128861616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2404 1 531 Glycosyltransferase AT2G20810 54.664 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2404 K13648 - gmx:100817381 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2404 20 128857416 128861616 Ahy20g2404 20 128857416 128861616 ECH
Ahy20g2404 20 128857416 128861616 Ahy10g1916 10 104534592 104538782 hybridization
Ahy11g2054 11 130317857 130322044 Ahy20g2404 20 128857416 128861616 PCT
Ahy1g2872 1 109388081 109392306 Ahy20g2404 20 128857416 128861616 PCT
Ahy20g2404 20 128857416 128861616 Ahy11g2054 11 130317857 130322044 PCT
Ahy20g2404 20 128857416 128861616 Ahy1g2872 1 109388081 109392306 PCT