Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2872 ATGCGGCGACGGGCCGCCGATTTTCGGCGCCCGGTTCGACGGAGGTTCTCTTATTGGATCTGGGTTCTCCTTGGTTTGTCCTCTGTTGTAGGGTTAGTCTTGTTCGTTGTGCATCATAATCAGAATGAAGATCGGGACGAGTATCCGTTGCTGGAGAGAAATGCTAGACTTGAACATTTTGCTAAGGAGAGTTTGAATTTTACTGAAGAAATTTTAAGTGTAAAATCATTTTCACGACAGTTAACCCAACAAATGATTCTTGCCAAGGCTTATGTAGTTATTGCCAAAGAGCACAACAATCTTCACCTTGCTTGGCAGCTTAGCGCAAAGATCAGAGGCTGCCAGCTTTTGCTTTCGAAAGCTGCGATGACAGGGGAGCCCGTAACACTGGAGGAAGCGGAGCCAATTATTAAAAGCCTTTCTTCTCTAATTTTTAAGGCACAAGACATTCATTATGACATTGCAACCACAATAGTGACTATGAAATCGCATATTCAAGCTCTTGAAGAGCGTGCCAATGCAGCCACGGTTCAAAGTACCGTGTTTGGTCAAATAGCAGCCGAGGGGTTACCGAAGAGTCTTCATTGCTTAAATGTGAAACTCATGTCTGATTGGCTAAAGAAGCCATCTCTGAAAGCACTCTCAGATGAGAAGAAAAACTCGCAGCGGCTTGTGGACAACAATCTCTATCATTTCTGCATATTTTCAGATAATGTACTGGCAACCTCAGTAGTTGTTAATTCAACTGTCTCCAATGCTGACCATCCAAAGCAGTTAGTCTTTCACATAGTCACTGATGGAGTCAATTATGGAGCAGTGCAAACATGGTTCCTCAGTAATGACTTTAAAGGGGCCACCATAGAGGTACAGAATATTGAGGAGTTTCACTGGTTGAATGCAAGTTATTCTCCTATTGTCAAGCAGCTCCTGAATCCAGACTCAAAAACCTTTTATTTTGGGCTATATCAGGATGCAAATGTCGAACCGAAAATGCGGAATCCCAAATTTTTGTCTTTATTGAATCATCTTCGGTTTTACATCCCCGAGATTTATCCACAACTTGAGAAGGTTGTTTTCTTGGATGATGATGTTGTTGTACAGAAGGACCTGACTCAGCTTTTCTCACTGGATCTGCATGGCAATGTAAATGGTGCAGTGGAAACTTGCCTTGAAGCATTTCATCGGTACTACAAATATCTCAACTTCTCAAACTCAATTATAAGCTCAAAGTTTGACCCTCAGGCATGTGCATGGGCATTCGGTATGAACATTTTTGACTTGGTTGCATGGAGGAAGGCGAATGCGACCGCCAAATATCATTACTGGCAAGAGCAGAACGCTGATGGGACACTCTGGAAGCTTGGGACTCTTCCTCCTGGTCTTCTATGTTTTTATGGTCTGACAGAGCCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTTAATATTGATAACCGTCTGATTGAAAGTGCGGCAGTCATTCACTTCAACGGGAACATGAAGCCATGGCTGAAGTTTGCTATAGGCAGGTATAAGCCACTATGGGACAAGTACATAAATCAAAGTCACCCTTATCTGCAAGACTGTGCCACAAGTTGA 1608 0.4297 MRRRAADFRRPVRRRFSYWIWVLLGLSSVVGLVLFVVHHNQNEDRDEYPLLERNARLEHFAKESLNFTEEILSVKSFSRQLTQQMILAKAYVVIAKEHNNLHLAWQLSAKIRGCQLLLSKAAMTGEPVTLEEAEPIIKSLSSLIFKAQDIHYDIATTIVTMKSHIQALEERANAATVQSTVFGQIAAEGLPKSLHCLNVKLMSDWLKKPSLKALSDEKKNSQRLVDNNLYHFCIFSDNVLATSVVVNSTVSNADHPKQLVFHIVTDGVNYGAVQTWFLSNDFKGATIEVQNIEEFHWLNASYSPIVKQLLNPDSKTFYFGLYQDANVEPKMRNPKFLSLLNHLRFYIPEIYPQLEKVVFLDDDVVVQKDLTQLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSKFDPQACAWAFGMNIFDLVAWRKANATAKYHYWQEQNADGTLWKLGTLPPGLLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKFAIGRYKPLWDKYINQSHPYLQDCATS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2872 535 CDD GT8_like_1 230 523 - -
Ahy1g2872 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 532 IPR029044 -
Ahy1g2872 535 Pfam Glycosyl transferase family 8 234 508 IPR002495 GO:0016757
Ahy1g2872 535 PANTHER HEXOSYLTRANSFERASE 3 535 - -
Ahy1g2872 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 532 IPR029044 -
Ahy1g2872 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 535 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2872 Ahy-Chr1 109388081 109392306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2872 1 532 Glycosyltransferase AT2G20810 54.749 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2872 K13648 - gmx:100805886 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2054 11 130317857 130322044 Ahy1g2872 1 109388081 109392306 hybridization
Ahy1g2872 1 109388081 109392306 Ahy20g2404 20 128857416 128861616 PCT
Ahy1g2872 1 109388081 109392306 Ahy10g1916 10 104534592 104538782 PCT
Ahy20g2404 20 128857416 128861616 Ahy1g2872 1 109388081 109392306 PCT
Ahy10g1916 10 104534592 104538782 Ahy1g2872 1 109388081 109392306 PCT