Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2054 ATGCGGCGACGGGCCGCCGATTTTCGGCGCCCGGTTCGACGGAGGTTCTCTTATTGGATCTGGGTTCTCCTTGGTTTGTCCTCTGTTGTAGGGTTAGTCTTGTTCGTTGTGCATCATAATCAGAATGAAGATCGGGACGAGTACCCCTTGCTGGAGAGAAATGCTAGACTTGAACATTTTGCTAAGGAGAGTTTGAATTTTACTGAAGAAATTTTAAGTGTAAAATCATTTTCACGACAGTTAACACAACAAATGATTCTTGCCAAGGCTTATGTAGTTATTGCCAAAGAGCACAACAATCTTCACCTTGCTTGGCAGCTTAGCGCAAAGATCAGAGGTTGCCAACTTTTGCTTTCGAAAGCTGCGATGACAGGGGAGCCCGTAACACTGGAGGAAGCAGAGCCAATTATTAAAAGCCTTTCTTCTCTAATTTTTAAGGCACAAGACATTCATTATGACATTGCAACCACAATAGTGACTATGAAATCGCATATTCAAGCTCTTGAAGAGCGTGCCAATGCAGCCACGGTTCAAAGTACCGTGTTTGGTCAAATAGCAGCCGAGGGGTTACCGAAGAGTCTTCATTGCTTAAATGTGAAACTCATGTCTGATTGGCTAAAGAAGCCATCTCTGAAAGCACTCTCAGATGAGAAGAAAAACTCGCAGCGGCTTGTGGACAACAATCTCTATCATTTCTGCATATTTTCAGATAATGTACTGGCAACCTCAGTAGTTGTTAATTCAACTGTCTCCAATGCTGACCATCCAAAGCAGTTAGTCTTTCACATAGTCACTGATGGAGTGAATTATGGAGCAATGCAAACATGGTTCCTCAGTAACGACTTTAAAGGGGCCACCATAGAGGTACAGAATATTGAGGAGTTTCACTGGTTGAATGCAAGTTATTCTCCTATTGTCAAGCAGCTCCTGAATCCAGACTCAAAAACCTTTTATTTTGGGCTATATCAGGATGCAAATGTCGAACCGAAAATGCGGAATCCCAAATTTTTGTCTTTATTGAATCATCTTCGGTTTTACATCCCCGAGATTTATCCACAACTTGAGAAGGTTGTTTTCTTGGATGATGATGTTGTTGTACAGAAGGACCTGACTCAGCTTTTCTCACTGGATCTGCATGGCAATGTAAATGGTGCAGTGGAAACTTGCCTTGAAGCATTTCATCGGTACTACAAATATCTCAACTTCTCAAACTCAATTATAAGCTCAAAGTTTGACCCTCAGGCATGTGCATGGGCATTCGGTATGAACATTTTTGACTTGGTTGCATGGAGGAAGGCGAATGCGACCGCCAAATATCATTACTGGCAAGAGCAGAACGCTGATGGGACACTCTGGAAGCTTGGGACTCTTCCTCCTGGTCTTCTATGTTTTTATGGTCTGACAGAGCCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTTAATATTGATAACCGCCTGATTGAAAGTGCGGCGGTCATTCACTTCAACGGGAACATGAAGCCATGGCTGAAGTTTGCTATAGGCAGGTATAAGCCACTATGGGACAAGTACATAAATCAAAGTCACCCTTATCTGCAAGACTGTGCCACAAGTTGA 1608 0.4291 MRRRAADFRRPVRRRFSYWIWVLLGLSSVVGLVLFVVHHNQNEDRDEYPLLERNARLEHFAKESLNFTEEILSVKSFSRQLTQQMILAKAYVVIAKEHNNLHLAWQLSAKIRGCQLLLSKAAMTGEPVTLEEAEPIIKSLSSLIFKAQDIHYDIATTIVTMKSHIQALEERANAATVQSTVFGQIAAEGLPKSLHCLNVKLMSDWLKKPSLKALSDEKKNSQRLVDNNLYHFCIFSDNVLATSVVVNSTVSNADHPKQLVFHIVTDGVNYGAMQTWFLSNDFKGATIEVQNIEEFHWLNASYSPIVKQLLNPDSKTFYFGLYQDANVEPKMRNPKFLSLLNHLRFYIPEIYPQLEKVVFLDDDVVVQKDLTQLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSKFDPQACAWAFGMNIFDLVAWRKANATAKYHYWQEQNADGTLWKLGTLPPGLLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKFAIGRYKPLWDKYINQSHPYLQDCATS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2054 535 CDD GT8_like_1 230 523 - -
Ahy11g2054 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 535 IPR029993 GO:0047262
Ahy11g2054 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 532 IPR029044 -
Ahy11g2054 535 PANTHER HEXOSYLTRANSFERASE 3 535 - -
Ahy11g2054 535 Pfam Glycosyl transferase family 8 234 508 IPR002495 GO:0016757
Ahy11g2054 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 532 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2054 Ahy-Chr11 130317857 130322044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2054 1 532 Glycosyltransferase AT2G20810 54.935 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2054 K13648 - gmx:100805886 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2054 11 130317857 130322044 Ahy11g2054 11 130317857 130322044 ECH
Ahy11g2054 11 130317857 130322044 Ahy1g2872 1 109388081 109392306 hybridization
Ahy11g2054 11 130317857 130322044 Ahy20g2404 20 128857416 128861616 PCT
Ahy11g2054 11 130317857 130322044 Ahy10g1916 10 104534592 104538782 PCT
Ahy20g2404 20 128857416 128861616 Ahy11g2054 11 130317857 130322044 PCT
Ahy10g1916 10 104534592 104538782 Ahy11g2054 11 130317857 130322044 PCT