Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1488 ATGAAGAAGCTTTGTCCAAATCTTGATCGAGAGGACGGTCTCGAAACGGTGCTGGAGGTTCCGATCCCGGAAGAGATACTTACGCACAAAGGGGGAGCCATAAGAGCATCATGGCAGAACATGAAGTCATGGATGAAGCAGCCATTATCATCAAATAGCAATAATGGAGAATCAAGATCGTCATCCATGGCTACAGCTTTTGGAGGAAGGAACACAGAGTTGCAGCTTTTGTTGGGTGTTGTAGGAGCGCCATTAATCCCTTCACCTATCTCCTCTGACAACAACCCCATCACTCGACCCATTAAAGATCAACGCATTGAGGCATCGATGGCAAAATACATAGTGAAGCAGTACGTGGCGGCGGTGGGGGGAGAGCGTGCGGTGAATTCAGTGGAGAGTATGTATGCAATGGGGCAGGTGAGGATGGCGACGACGGAGTTTTCGGCGGCGGGGGAAGGGAGTAATAAAGGAAACAAAAATAATAATAAGATAATGAAGATGAAGAAGTTGGAGAGAAAGGGGAAGATGGGGGGTTTTGTTATGTGGCAGAAGAGTCCAGAGCTTTGGTGCTTGGAGCTTGTGGTATCAGGGTGCAAGATCAGTGCTGGTAGTGATGGCAAAGTAGCATGGAGGCAAACACCTTGGCACCATTCTCACGCTTCTCGAGGCCCGCCACGCCCTCTTCGCCGTTTTCTACAGGGTCTTGATCCAAGGTCCACAGCAAATCTGTTCAGCAACTCCATATGCATTGGAGAGAAGACAGTGAACATGGAGGACTGTTTCATACTTCGACATGAAGCTGAGACGTCGGCGCTGCAAGCACGAAGTAACAGCAACGTGGAGATAGTACGGCACACCGTGTGGGGCTACTTCAGCCAAAGAACAGGCCTCTTGGTGCAGCTAGAGGACTCACACCTTCTCAAGCTCAAGACCTCAGCAACAGAAACCATATACTGGGAAACCAACATGGAGTCCCTCATACAAGACTACAGAGCCATCGACGCCATCCAGATAGCGCACGGTGGGACGACACGGGTGTCATTGTTCCGGTTTGGCGAGGGACCTGAGACGCATTCGAGGACAAGGATGGAAGAGAGTTGGCAGGTTGAGGAAGTTGACTTTAATGTTCAAGGCTTGTCCTTGGATTGTTTCTTGCCACCTAGTGACTTGAGGAGGGAGGAGCATGGCAGCGAAGATGGTTGTGGTGGTGGCAGGGTGGTTCCTACCGGAAATTCCAAGTTGCCATACAAGATTCGCTCAGCTTCTTTTAGGATCAGCACTTCCAAAGTGGCGGCAGTTAACATGGATGATGATTCTTGCACCAGTGATGATGAGAGTAATGAAGAAGAGTTGTAA 1356 0.4971 MKKLCPNLDREDGLETVLEVPIPEEILTHKGGAIRASWQNMKSWMKQPLSSNSNNGESRSSSMATAFGGRNTELQLLLGVVGAPLIPSPISSDNNPITRPIKDQRIEASMAKYIVKQYVAAVGGERAVNSVESMYAMGQVRMATTEFSAAGEGSNKGNKNNNKIMKMKKLERKGKMGGFVMWQKSPELWCLELVVSGCKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLFSNSICIGEKTVNMEDCFILRHEAETSALQARSNSNVEIVRHTVWGYFSQRTGLLVQLEDSHLLKLKTSATETIYWETNMESLIQDYRAIDAIQIAHGGTTRVSLFRFGEGPETHSRTRMEESWQVEEVDFNVQGLSLDCFLPPSDLRREEHGSEDGCGGGRVVPTGNSKLPYKIRSASFRISTSKVAAVNMDDDSCTSDDESNEEEL* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1488 451 PANTHER LIPASE 1 441 - -
Ahy20g1488 451 Pfam Protein of unknown function (DUF620) 134 387 IPR006873 -
Ahy20g1488 451 PANTHER LIPASE 1 441 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1488 Ahy-Chr20 42088797 42092416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1488 - - gmx:100783667 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1488 20 42088797 42092416 Ahy20g1488 20 42088797 42092416 ECH
Ahy20g1488 20 42088797 42092416 Ahy10g1100 10 27926820 27930362 hybridization
Ahy20g1488 20 42088797 42092416 Ahy17g1008 17 12790263 12794444 PCT
Ahy20g1488 20 42088797 42092416 Ahy7g0831 7 10640215 10644283 PCT
Ahy17g1008 17 12790263 12794444 Ahy20g1488 20 42088797 42092416 PCT
Ahy7g0831 7 10640215 10644283 Ahy20g1488 20 42088797 42092416 PCT