Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1008 ATGAAGAAGTTGTGTCGGAATCTTGATCGAGAGGATGGGCTTGAAACTGTGCTTGAAGTCCCAATTCCAGAAGAGATTTTCAGCAGCAAGAACAGGGCATGGCAGAACATGAAGTCATGGATGAAGCCAAACGCTGAACCCACATCATCAGTATTCGGAGGCAAAACTACAGAGATCCAACTATTGTTGGGTGTTATTGGAGCACCATTACTCCCCTTCCCTATAAGCTCTCACAACAACAACCAACCCATCATCTCCTGCAACATCAAACACCATAATAACATTGAGGGTTCAATGGCGAAATATATTGTAAAGCAGTACGTGGCAGCAGTGGGAGGAGAAAGAGCTTTAAACTCGGTAGAAAGCATGTATGCAATGGGTCAGGTGAGGGTAGGGAGCTCGGAGTTCTGGGGAGGGGAAGAAGGTGTTATGAAGAAGAAAAAGAAAAAGAAGAGGACGACAAAGGAGGTGGCTGCGGCGGCGGGGGAGATGGGAGGGTTTGTGGTGTGGCAGAAGAAGCCGGAGTTGTGGTGCTTGGAGCTGGTGGTTTCCGGTTACAAGATAAGTGCCGGCAGTGATGGAAAAGTTGCTTGGAGGCAAACACCTTGGCATCATTCTCATGCCTCTAGAGGGCCCCCACGACCACTTAGGCGTTTAATTCAGGGTATTGATCCAAGATCCACTGCCAATCTTTTCAACAACTCAATATGCATTGGCGAGAAGACAGTGAACAATGAAGAATGTTTCACACTAAAACTAGAAGCAGAGTCAGCATCACTTAAAGCAAGAAGCAGCAGCAATGTAGAAATAATCCAACACACACTATGGGGCCATTTCAGCCAGAGAACAGGCCTTCTTGTTCAATTACAAGACTCCTACTTGCTCAAACTCAAGTCCTCGCCGTCATCCCAATCCGGCGACGCGGCCGTATTCTGGGAAACCAACATGGAGTCCCTAATACAAGACTACAGAGCCGTGGACGGCATCCAAATCGCGCACGCCGGGAAGACATCTGTGTCGTTGTCAAGGTTCGGAGCCGAGGGGCCGAATGATTTTTCTAGGACAAGAATGGAAGAGACATGGAAAATTGAAGAAGTGGATTTTAATATTAAAGGCTTGTCCATGGAATGTTTCTTGCCACCTAGTGATTTGAAGAGAGGTGAACAACATAAAGCAGGGGAAGTGGCTACCACCATTACTACTACTTCTACTACAAGCAACAATAATAATAACAATGCTAATAAGTTGCCATTTAAGATTCGACAAGCTTCTTTTAAGATTAGTGCTTCCAAGGTAGCTGCTGTTAACTTGGATGATTCAAGTGATGAAAGTGAAAGTGATGAGGACGTAATGATCCAAGAGTGA 1365 0.4579 MKKLCRNLDREDGLETVLEVPIPEEIFSSKNRAWQNMKSWMKPNAEPTSSVFGGKTTEIQLLLGVIGAPLLPFPISSHNNNQPIISCNIKHHNNIEGSMAKYIVKQYVAAVGGERALNSVESMYAMGQVRVGSSEFWGGEEGVMKKKKKKKRTTKEVAAAAGEMGGFVVWQKKPELWCLELVVSGYKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRLIQGIDPRSTANLFNNSICIGEKTVNNEECFTLKLEAESASLKARSSSNVEIIQHTLWGHFSQRTGLLVQLQDSYLLKLKSSPSSQSGDAAVFWETNMESLIQDYRAVDGIQIAHAGKTSVSLSRFGAEGPNDFSRTRMEETWKIEEVDFNIKGLSMECFLPPSDLKRGEQHKAGEVATTITTTSTTSNNNNNNANKLPFKIRQASFKISASKVAAVNLDDSSDESESDEDVMIQE* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1008 454 PANTHER LIPASE 1 443 IPR006873 -
Ahy17g1008 454 Pfam Protein of unknown function (DUF620) 123 381 IPR006873 -
Ahy17g1008 454 PANTHER LIPASE 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1008 Ahy-Chr17 12790263 12794444 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1008 - - adu:107457780 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1008 17 12790263 12794444 Ahy17g1008 17 12790263 12794444 ECH
Ahy17g1008 17 12790263 12794444 Ahy7g0831 7 10640215 10644283 hybridization
Ahy20g1488 20 42088797 42092416 Ahy17g1008 17 12790263 12794444 PCT
Ahy10g1100 10 27926820 27930362 Ahy17g1008 17 12790263 12794444 PCT
Ahy17g1008 17 12790263 12794444 Ahy20g1488 20 42088797 42092416 PCT
Ahy17g1008 17 12790263 12794444 Ahy10g1100 10 27926820 27930362 PCT