Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1100 ATGAAGAAGCTTTGTCCAAATCTTGATCGAGAGGACGGTCTCGAAACGGTGCTGGAGGTTCCGATCCCGGAAGAGATTCTTACGCACAAAGGGGGAGCCATAAGAGCATCATGGCAGAACATGAAGCCATGGATGAAGCAGCCATTATCATCAAATAGCAATAATGGAGAATCAAGATCGTCATCCATGGCTACAGCTTTTGGAGGAAGGAACACAGAGTTGCAGCTTTTGTTGGGTGTTGTAGGAGCGCCATTAATCCCTTCACCTATCTCCTCTGACAACAACCCCATCACTCGACCCATTAAAGATCAACGCATTGAGGCATCGATGGCAGAATACATAGTGAAGCAGTACGTGGCGGCGGTGGGGGGAGAGCGTGCGGTGAATTCAGTGGAGAGTATGTATGCAATGGGGCAGGTGAGGATGGCGACGACGGAGTTTTCGACGGCGGGGGAAGGGAGTAATAAAGGAAACAAAAATAATAAGAAGATAATGAAGATGAAGAAGTTGGAGACAAAGGGGAAGATGGGGGGTTTTGTTATGTGGCAGAAGAGTCCAGAGCTCTGGTGCTTGGAGCTTGTGGTATCAGGGTGCAAGATCAGTGCTGGTAGTGATGGCAAAGTAGCATGGAGGCAAACACCTTGGCACCATTCTCACGCTTCTCGAGGCCCGCCGCGCCCTCTTCGCCGTTTTCTACAGGGTCTTGATCCAAGGTCCACAGCAAATCTGTTCAGCAACTCCATATGCATTGGAGAGAAGACAGTGAACATGGAGGACTGTTTCATACTTCGACACGAAGCTGAGACGTCGGCGCTGCAAGCACGAAGTAACAGAAACGTGGAGATAGTACGGCACACCGTGTGGGGCTACTTCAGCCAAAGAACAGGCCTCTTGGTGCAGCTAGAGGACTCACACCTTCTCAAACTCAAGACCTCAGCAACAGAAACCATATACTGGGAAACCAACATGGAGTCCCTCATACAAGACTACAGAGCCATCGATGCCGTCCAGATAGCGCACTGTGGGACGACACAGGTGTCATTGTTCCGGTTTGGTGAGGGACCTGAGACGCATTCGAGGACAAGGATGGAAGAGAGTTGGCAGGTTGAGGAAGTTGACTTTAATGTTCAAGGCTTGTCCTTAGATTGTTTCTTGCCACCAAGTGACTTGAGGAGGGAGGAGCATGGCAGTGAAGATGGTTGTGGTGGTGACAGGGTGGTTGCTTCCGGAAATTCCAAGTTGCCATACAAGATTCGCTCGGCTTCTTTTAGGATCAGCACTTCCAAAGTGGCGGCAGTAAACATGGATGATGATGATTCTTGCACCAGTGATGATGAGAGTAATGAAGAAGAGTTGTAA 1359 0.4952 MKKLCPNLDREDGLETVLEVPIPEEILTHKGGAIRASWQNMKPWMKQPLSSNSNNGESRSSSMATAFGGRNTELQLLLGVVGAPLIPSPISSDNNPITRPIKDQRIEASMAEYIVKQYVAAVGGERAVNSVESMYAMGQVRMATTEFSTAGEGSNKGNKNNKKIMKMKKLETKGKMGGFVMWQKSPELWCLELVVSGCKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLFSNSICIGEKTVNMEDCFILRHEAETSALQARSNRNVEIVRHTVWGYFSQRTGLLVQLEDSHLLKLKTSATETIYWETNMESLIQDYRAIDAVQIAHCGTTQVSLFRFGEGPETHSRTRMEESWQVEEVDFNVQGLSLDCFLPPSDLRREEHGSEDGCGGDRVVASGNSKLPYKIRSASFRISTSKVAAVNMDDDDSCTSDDESNEEEL* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1100 452 Pfam Protein of unknown function (DUF620) 134 387 IPR006873 -
Ahy10g1100 452 PANTHER LIPASE 1 441 - -
Ahy10g1100 452 PANTHER LIPASE 1 441 IPR006873 -
Ahy10g1100 452 MobiDBLite consensus disorder prediction 45 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1100 Ahy-Chr10 27926820 27930362 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1100 - - gmx:100783667 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1488 20 42088797 42092416 Ahy10g1100 10 27926820 27930362 hybridization
Ahy10g1100 10 27926820 27930362 Ahy17g1008 17 12790263 12794444 PCT
Ahy10g1100 10 27926820 27930362 Ahy7g0831 7 10640215 10644283 PCT
Ahy17g1008 17 12790263 12794444 Ahy10g1100 10 27926820 27930362 PCT
Ahy7g0831 7 10640215 10644283 Ahy10g1100 10 27926820 27930362 PCT