Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1478 ATGAAGGGTTCGAGCCGTTTCTTCACGGTAGGTCTTGTAGCTTCATGGTACTCCTCCAACATTGGCGTTCTCCTTCTCAACAAGTACCTTCTCAGCAACTATGGCTTCAAGTACCCGATCTTCCTCACCATGTGCCACATGACAGCATGTTCTTTGTTCAGTTATGTTGCCATAGCGTGGATGAAGGTGGTGCCTTTGCAAACCATACGATCCAGGGTTCAGTTCTTCAAGATCTCTGCTTTGAGCCTTATTTTCTGTGTCTCCGTTGTGTTTGGTAACGTGTCGTTGAGGTACCTTCCTGTGTCGTTTAACCAAGCAATTGGTGCCACAACGCCTTTCTTCACTGCCGTTTTTGCTTACCTAATGACGTTTAAGAGGGAGGCTTGGCTCACATATCTCACACTTGTTCCGGTTGTCACTGGTGTCATCATTGCCAGCGGGGGTGAACCAAGTTTCCATTTATTTGGATTCATTATATGTGTTGCCGCTACAGCTGCAAGAGCCCTGAAATCAGTGCTACAAGGAATTTTGCTTTCTTCCGAAGGAGAGAAGCTCAATTCTATGAATCTTCTCCTTTACATGGCTCCTATGGCGGTGGTTTTCCTTCTTCCCGCTACACTTATAATGGAAGAAAATGTGGTTGGAATCACTTTGGCGCTTGCCAGAGATGATTCCAAGATCATTTGGTACCTGCTATTCAATTCGGCGCTCGCATATTTTGTCAACCTGACCAATTTCTTGGTCACAAAACATACAAGTGCTCTGACCCTTCAGGTACTAGGGAATGCTAAAGGGGCTGTAGCAGTAGTAGTATCAATTCTAATATTTAGAAACCCAGTTTCGGTTACTGGAATGATGGGGTACACCCTCACAGTCTTTGGAGTTATCCTTTACAGTGACGCGAAAAAGCGAACCAAATGA 921 0.4506 MKGSSRFFTVGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWMKVVPLQTIRSRVQFFKISALSLIFCVSVVFGNVSLRYLPVSFNQAIGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVIIASGGEPSFHLFGFIICVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDSKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYTLTVFGVILYSDAKKRTK* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1478 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 197 299 - -
Ahy20g1478 306 PANTHER - 1 305 - -
Ahy20g1478 306 Pfam Triose-phosphate Transporter family 12 299 IPR004853 -
Ahy20g1478 306 PANTHER SOLUTE CARRIER FAMILY 35 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1478 Ahy-Chr20 41452760 41456394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1478 1 306 Organic Solute Cotransporters AT3G11320 89.869 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1478 - - gmx:100785614 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0998 17 12528218 12530899 Ahy20g1478 20 41452760 41456394 ECH
Ahy14g1785 14 101288325 101292935 Ahy20g1478 20 41452760 41456394 ECH
Ahy12g1926 12 100852502 100858215 Ahy20g1478 20 41452760 41456394 ECH
Ahy11g0453 11 6183952 6186221 Ahy20g1478 20 41452760 41456394 ECH
Ahy20g1478 20 41452760 41456394 Ahy20g1478 20 41452760 41456394 ECH
Ahy20g1478 20 41452760 41456394 Ahy10g1090 10 27557623 27561070 hybridization
Ahy20g1478 20 41452760 41456394 Ahy17g0998 17 12528218 12530899 PCT
Ahy20g1478 20 41452760 41456394 Ahy7g0824 7 10490600 10493454 PCT
Ahy17g0998 17 12528218 12530899 Ahy20g1478 20 41452760 41456394 PCT
Ahy7g0824 7 10490600 10493454 Ahy20g1478 20 41452760 41456394 PCT