Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1090 ATGAAGGGTTCGAGCCGTTTCTTCACGGTGGGTCTTGTAGCTTCATGGTACTCCTCCAACATTGGCGTTCTCCTTCTCAACAAGTACCTTCTCAGCAACTATGGCTTCAAGTACCCGATCTTCCTCACCATGTGCCACATGACAGCATGTTCTTTGTTCAGTTATGTTGCCATAGCGTGGATGAAGGTGGTGCCTTTGCAAACCATACGATCCAGGGTTCAGTTCTTCAAGATCTCTGCTTTGAGCCTTATTTTTTGTGTCTCCGTTGTGTTTGGGAACGTGTCGTTGAGGTACCTTCCTGTGTCGTTTAACCAAGCAATTGGTGCCACAACGCCTTTCTTCACTGCCGTTTTTGCTTACCTAATGACGTTTAAGAGGGAGGCTTGGCTCACATATCTCACACTTGTTCCGGTTGTCACTGGTGTCATCATTGCCAGCGGGGGTGAACCAAGTTTCCATTTATTTGGATTCATTATATGTGTTGCTGCTACAGCTGCAAGAGCCCTGAAATCAGTGCTACAAGGGATTTTGCTTTCTTCCGAAGGAGAGAAGCTCAATTCTATGAATCTTCTCCTTTACATGGCTCCTATGGCGGTGGTTTTCCTTCTTCCCGCTACACTTATAATGGAAGAAAATGTGGTTGGAATCACTTTGGCGCTTGCCAGAGATGATTCCAAGATCATTTGGTATCTGCTATTCAATTCGGCGCTCGCATATTTTGTCAACCTGACCAATTTCTTGGTCACAAAACATACAAGTGCTCTGACCCTTCAGGTACTAGGGAATGCTAAAGGGGCTGTAGCAGTAGTAGTATCAATTCTAATATTTAGAAACCCAGTTTCGGTTACTGGAATGATGGGATACACCCTCACAGTCTTTGGAGTTATCCTTTACAGTGAAGCGAAAAAGCGAACCAAATGA 921 0.4484 MKGSSRFFTVGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWMKVVPLQTIRSRVQFFKISALSLIFCVSVVFGNVSLRYLPVSFNQAIGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVIIASGGEPSFHLFGFIICVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDSKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYTLTVFGVILYSEAKKRTK* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1090 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 197 300 - -
Ahy10g1090 306 PANTHER SOLUTE CARRIER FAMILY 35 1 305 - -
Ahy10g1090 306 Pfam Triose-phosphate Transporter family 12 299 IPR004853 -
Ahy10g1090 306 PANTHER - 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1090 Ahy-Chr10 27557623 27561070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1090 1 306 Organic Solute Cotransporters AT3G11320 90.196 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1090 - - gmx:100785614 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1478 20 41452760 41456394 Ahy10g1090 10 27557623 27561070 hybridization
Ahy10g1090 10 27557623 27561070 Ahy17g0998 17 12528218 12530899 PCT
Ahy10g1090 10 27557623 27561070 Ahy7g0824 7 10490600 10493454 PCT
Ahy17g0998 17 12528218 12530899 Ahy10g1090 10 27557623 27561070 PCT
Ahy7g0824 7 10490600 10493454 Ahy10g1090 10 27557623 27561070 PCT