Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1926 ATGATAATGATGGACTCAATTCCATGGTCAACGATCATGGTGGTGACTTCATGGTACAGTTCAAACATCGGTGTGCTTCTTATGAACAAGTACCTTCTAACAAATTACGGGTTCAAGTTCCCAGTGTTTCTCACCATGTGCCACATGATGTGTTGTTCTATCTTCAGCTTCATTGGTATTCAAGTGATGGACATTGTCCCTTTTCAAAGCATACAATCAAGGGAACAGTTGGTGAAGATTTGTGTTCTGAGCCTTGTTTTTTGCTTCTCAGTTGTTTGTGGAAATGTGTCACTGAATTACATACCCGTGTCTTTCAATCAAGCAATTGGTGCCACCACACCTTTCTTCACTGCGGTTTGTGCTTATTTTGTCACCAGAAAAAGAGAGGCTTGGCTTACCTATGCAACACTCTTGCCCGTTGTTGCTGGTGTCATCATAGCTAGTGAGTCTGAACCTAGTTTCAATCTATTTGGATTTATAATATGCGTTTCATCAACCTTTTCGAGAGCTTTCAAGTCGGTCCTTCAAGATCTTTTGTTGTCCTCTGAGGGAGAAAAGTTAAACTCTATGAACCTGCTGCTTTATATGGCACCCATGGCAATGTTGGTCTTGCTTCCTGCAACATTGTTGATGGAGAAGAATGTGATTCAAATCACAATAGATGTAGCAAGAAATGATATCAGAATTATAGGTTTTCTGCTCTTCAGTTCTTCTCTTGCATATTTTGTCAACCTAACCAATTTTTTGGTGACAAAACACACAAGTGCATTGACTCTTCAGGTTTTAGGAAATGCAAAGGGGGCAGTTGCAGTGGTGGTCTCAATTTTGATTTTCAAGAATCCAATTTCCATGATAGGAATGTGTGGTTATGCCTTCACTGTTCTTGGAGTTATCTTATACACTGAAGCCAAAAAGAGATATAGTTAG 927 0.397 MIMMDSIPWSTIMVVTSWYSSNIGVLLMNKYLLTNYGFKFPVFLTMCHMMCCSIFSFIGIQVMDIVPFQSIQSREQLVKICVLSLVFCFSVVCGNVSLNYIPVSFNQAIGATTPFFTAVCAYFVTRKREAWLTYATLLPVVAGVIIASESEPSFNLFGFIICVSSTFSRAFKSVLQDLLLSSEGEKLNSMNLLLYMAPMAMLVLLPATLLMEKNVIQITIDVARNDIRIIGFLLFSSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFKNPISMIGMCGYAFTVLGVILYTEAKKRYS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1926 308 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 5 308 - -
Ahy12g1926 308 Pfam Triose-phosphate Transporter family 13 300 IPR004853 -
Ahy12g1926 308 SUPERFAMILY Multidrug resistance efflux transporter EmrE 72 148 - -
Ahy12g1926 308 PANTHER SOLUTE CARRIER FAMILY 35 5 308 - -
Ahy12g1926 308 SUPERFAMILY Multidrug resistance efflux transporter EmrE 199 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1926 Ahy-Chr12 100852502 100858215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1926 11 306 Organic Solute Cotransporters AT3G11320 74.324 4.02e-163 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1926 - - gmx:100799632 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1926 12 100852502 100858215 Ahy17g0998 17 12528218 12530899 ECH
Ahy12g1926 12 100852502 100858215 Ahy20g1478 20 41452760 41456394 ECH
Ahy12g1926 12 100852502 100858215 Ahy12g1926 12 100852502 100858215 ECH
Ahy12g1926 12 100852502 100858215 Ahy11g0453 11 6183952 6186221 ECH