Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1439 ATGGAAGCGAAGAAGCAAGCGGAAGAAGCCATAATGGCGGCAGCGGAGAGAGGTGACGTCGGAGACGGAGACGAAGAGATCAATTCAAAGTTTAGCTTGAAATCCGCTCTCTGGCACGGTGGCTCTGCCTATGATGCATGGTTCAGCTGTTCCTCAAATCAGGTCGCACAGGTTCTGTTAACGCTTCCATACTCATTCTCGCAATTGGGAATGGTTTCGGGGATCATATTCCAAGTGTTCTATGGATTTCTTGGAAGCTGGACCGCTTATTTGATTAGCATTCTCTACATCGAGTACAGAAGCCGCAAGGAGAAAGAGAATGTTAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGTTGGAAGGTTTATTAGGACCATCTTGGAAAGCAATTGGATTGGCCTTCAACTGCACTTTTCTTCTCTTTGGATCTGTGATTCAGCTTATAGCTTGTGCAAGCAATATATACTATATAAATGATAAATTGGACAAGAGGACTTGGACCTACATTTTCGGAGCTTGCTGTGCTACCACAGTGTTCATACCATCATTCCATAACTACAGGATTTGGTCCTTCCTTGGCCTTGGCATGACCACCTACACTGCTTGGTATCTCACCATTGCTTCCATTGTTCATGGCCAGGTAGAAAATGTGACCCATTCGGGCCCATCCAAAATGGTATTGTATTTCACAGGCGCCACCAACATTCTCTACACTTTCGGCGGCCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCACAGAAGTTCAAATATATCTATCTTTATGCAACTCTTTATGTGTTCACCCTAACCCTACCATCTGCCACTGCCGTTTACTGGGCCTTTGGTGATCAACTCCTGGACCACTCCAACGCCTTCTCCCTCCTCCCCCGGAACGGTTGGCGGGACGCCGGAGTCATTCTAATGCTCATTCACCAGTTCATCACATTTGGATTTGCCTGTACGCCATTGTATTTTGTGTGGGAAAAAGTGATAGGGATGCATGACACAAAGAGCATATGTTTGAGGGCATTAGCAAGGTTACCAGTGGTAATACCAATATGGTTTCTGGCAATAATCTTCCCATTCTTTGGGCCCATAAACTCAGCTGTGGGTGCTCTCTTGGTCAGTTTCACTGTCTACATCATTCCTGCCTCTGCCCATATGCTCACTTTCAAGTCTGCCTCCTCTAGACAGAATGCTGCAGAGAAATTGCCATGGTTCATCCCTAATTGGACAGTGATGTACATAGTCAACGCATTTGTGGTAGTATGGGTTTTTGTACTGGGCTTTGGGTTTGGAGGGTGGGCCAGCATGACAAATTTCATCAAGCAAGTGGACACATTTGGGCTTTTTGCCAAATGCTATCAATGCCCACCAAAAATCCTACCTTCCAAAAATCATACTATTACTATGTATCACTAA 1437 0.4537 MEAKKQAEEAIMAAAERGDVGDGDEEINSKFSLKSALWHGGSAYDAWFSCSSNQVAQVLLTLPYSFSQLGMVSGIIFQVFYGFLGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPSWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASIVHGQVENVTHSGPSKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATLYVFTLTLPSATAVYWAFGDQLLDHSNAFSLLPRNGWRDAGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTFKSASSRQNAAEKLPWFIPNWTVMYIVNAFVVVWVFVLGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKILPSKNHTITMYH* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1439 478 Pfam Transmembrane amino acid transporter protein 39 432 IPR013057 -
Ahy20g1439 478 PANTHER AUXIN INFLUX TRANSPORTER 3 465 - -
Ahy20g1439 478 PANTHER OS05G0424000 PROTEIN-RELATED 3 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1439 Ahy-Chr20 36416924 36423296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1439 1 462 Organic Solute Cotransporters AT2G21050 77.922 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1439 K13946 - gmx:100795466 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0966 17 11853215 11860377 Ahy20g1439 20 36416924 36423296 ECH
Ahy20g1439 20 36416924 36423296 Ahy20g1439 20 36416924 36423296 ECH
Ahy20g1439 20 36416924 36423296 Ahy10g1066 10 25019444 25025635 hybridization
Ahy20g1439 20 36416924 36423296 Ahy17g0966 17 11853215 11860377 PCT
Ahy20g1439 20 36416924 36423296 Ahy7g0792 7 9927167 9934474 PCT
Ahy17g0966 17 11853215 11860377 Ahy20g1439 20 36416924 36423296 PCT
Ahy7g0792 7 9927167 9934474 Ahy20g1439 20 36416924 36423296 PCT