Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0966 ATGTCAAGACAGAAGCAAGGAGGTGAAGAAACCATGATGTCAAGCCTGAATGAAACAATTGAAAGAGAAGAAAGAGAGGAGTTGGAGAAAGAAGGTGGTGGCTCAGGTTCACATTCCTCCTTGAAAAGCCTTCTCTGGCATGGTGGTTCTGCTTATGATGCTTGGTTCAGCTGTGCCTCAAATCAGGTAGCACAGGTTCTGTTAACACTGCCATACTCATTCTCACAGCTAGGGATGCTTTCAGGAATCATACTACAAATCTTCTATGGAATTCTTGGTAGTTGGACTGCTTATTTGATAAGCATTCTCTACATTGAGTACAGAACCCGCAAGGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTTGAGGTGTTGGATGGACTCCTGGGACCTTACTGGAAAGCCGTTGGATTGGCATTCAACTGCACTTTTCTACTCTTTGGATCTGTTATCCAGCTGATAGCCTGTGCAAGTAACATATACTACATAAACGATCACTTGGATAAGAGAACATGGACATACATATTCGGAGCATGCTGTGCCACCACAGTCTTCATACCATCATTTCATAACTACAGGATTTGGTCCTTCCTTGGCCTTGCCATGACCACCTACACTGCTTGGTATTTAACCATTGCTGCCCTTCTTCATGGCCAGGTTGAAAATGTAAGTCACACGGGCCCAAACAAGTTGGTTTTGTATTTCACAGGCGCCACCAACATACTCTACACTTTCGGCGGCCATGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAACCTCAAAAGTTCAAGTATATCTATCTTTTTGCCACTATCTATGTGTTCACCCTCACTCTTCCATCTGCTATTGCTGTCTATTGGGCATTTGGTGACCAACTCTTAGACCATTCCAATGCCTTCTCCCTTCTTCCCCGCTCCGGCTGGCGCGACGCCGGCGTAATCTTAATGCTCATTCATCAGTTCATAACATTTGGATTTGCATGCACACCATTGTACTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAAAGCATATGTTTAAGGGCATTAGCAAGGTTACCAGTGGTGATACCAATATGGTTTTTGGCCATAATTTTCCCATTCTTTGGACCCATAAATTCAGCTGTTGGGGCACTTTTGGTTAGCTTCACAGTCTATATCATCCCTGCTTCTGCTCATATGCTCACTTACAAGTCTGCCTCTGCTAGACAGAATGCAGCAGAGAAATTGCCGGTGTTCATTCCAAATTGGACAGTAATGTTTGTTGTGAATGCATTTGTGGTGGTGTGGGTATTTGTGGTAGGGTTTGGATTTGGAGGGTGGGCAAGCATGACTAACTTCATCAAACAAGTTGACACATTTGGATTATTTGCTAAGTGCTACCAATGCCCACCAAAAATCTCTGCTTCCAATCACACAGCAACACTTCATCATTGA 1458 0.4376 MSRQKQGGEETMMSSLNETIEREEREELEKEGGGSGSHSSLKSLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGILGSWTAYLISILYIEYRTRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLAMTTYTAWYLTIAALLHGQVENVSHTGPNKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATIYVFTLTLPSAIAVYWAFGDQLLDHSNAFSLLPRSGWRDAGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTYKSASARQNAAEKLPVFIPNWTVMFVVNAFVVVWVFVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKISASNHTATLHH* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0966 485 PANTHER OS05G0424000 PROTEIN-RELATED 4 473 - -
Ahy17g0966 485 Pfam Transmembrane amino acid transporter protein 47 440 IPR013057 -
Ahy17g0966 485 MobiDBLite consensus disorder prediction 1 38 - -
Ahy17g0966 485 MobiDBLite consensus disorder prediction 1 15 - -
Ahy17g0966 485 MobiDBLite consensus disorder prediction 16 33 - -
Ahy17g0966 485 PANTHER AUXIN INFLUX TRANSPORTER 4 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0966 Ahy-Chr17 11853215 11860377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0966 18 470 Organic Solute Cotransporters AT2G21050 80.353 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0966 K13946 - gmx:100817572 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0966 17 11853215 11860377 Ahy20g1439 20 36416924 36423296 ECH
Ahy17g0966 17 11853215 11860377 Ahy17g0966 17 11853215 11860377 ECH
Ahy17g0966 17 11853215 11860377 Ahy7g0792 7 9927167 9934474 hybridization
Ahy20g1439 20 36416924 36423296 Ahy17g0966 17 11853215 11860377 PCT
Ahy10g1066 10 25019444 25025635 Ahy17g0966 17 11853215 11860377 PCT
Ahy17g0966 17 11853215 11860377 Ahy20g1439 20 36416924 36423296 PCT
Ahy17g0966 17 11853215 11860377 Ahy10g1066 10 25019444 25025635 PCT