Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1066 ATGGAATCGAAGAAGCAAGCGGAAGAAGCCATAATGGCGGCAGCGGAGAGCGGTGATGTCGGAGACGGAGACAAAGAGATCAATTCAAAGTTAAGCTTGAAATCCGCTCTCTGGCACGGTGGCTCTGCCTATGATGCATGGTTCAGCTGTTCCTCAAATCAGGTCGCACAGGTTCTGTTAACGCTTCCATACTCATTCTCGCAACTGGGAATGGTTTCAGGGATCATATTCCAAGTGTTCTATGGATTTCTTGGAAGCTGGACCGCTTACTTGATTAGCATTCTCTACATCGAGTACAGAAGCCGCAAGGAGAAAGAGAATGTTAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGCTGGAAGGTTTATTAGGACCATCTTGGAAAGCAATTGGATTGGCCTTCAACTGCACTTTTCTTCTCTTTGGATCTGTGATTCAGCTTATAGCTTGTGCAAGCAATATATACTATATAAATGATAAATTGGACAAGAGGACTTGGACCTACATTTTCGGAGCTTGCTGTGCTACCACAGTGTTCATACCATCATTCCATAACTACAGGATTTGGTCCTTCCTTGGCCTTGGCATGACCACCTACACTGCTTGGTATCTCACCATTGCTTCCATTGTTCATGGCCAGGTAGAAAATGTGACCCATTCGGGCCCATCCAAAATGGTATTGTATTTCACAGGCGCCACAAACATTCTCTACACTTTCGGCGGCCACGCCGTCACCGTGGAAATCATGCATGCAATGTGGAAGCCACAGAAGTTCAAATATATCTATCTTTATGCAACTCTTTATGTGTTCACCCTAACCCTACCATCTGCCACTGCCGTTTACTGGGCCTTTGGTGATCAACTCCTGGACCACTCCAACGCCTTCTCCCTCCTCCCCCGGAACGGTTGGCGCGACGCCGGAGTCATCCTAATGCTCATTCACCAGTTCATCACATTTGGATTTGCCTGTACGCCATTGTATTTTGTGTGGGAAAAAGTGATAGGGATGCATGACACAAAGAGCATATGTTTGAGGGCATTAGCAAGGTTACCAGTGGTAATACCAATATGGTTTCTGGCAATAATCTTCCCATTCTTTGGGCCTATAAACTCAGCTGTGGGTGCTCTCTTGGTCAGTTTCACTGTCTACATCATTCCTGCCTCTGCCCATATGCTCACTTTCAAGTCTGCCTCCTCTAGACAGAATGCTGCAGAGAAATTGCCATGGTTCATCCCTAATTGGACAGTCATGTACATAGTCAACGCATTTGTGGTAGTATGGGTTTTTGTACTGGGCTTTGGGTTTGGAGGGTGGGCCAGCATGACAAATTTCATCAAGCAAGTGGACACATTTGGGCTTTTCGCCAAATGTTATCAATGCCCACCAAAAATCATACCTTCCAAAAATCATACTATTACTATGTATCACTAA 1437 0.453 MESKKQAEEAIMAAAESGDVGDGDKEINSKLSLKSALWHGGSAYDAWFSCSSNQVAQVLLTLPYSFSQLGMVSGIIFQVFYGFLGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPSWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASIVHGQVENVTHSGPSKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATLYVFTLTLPSATAVYWAFGDQLLDHSNAFSLLPRNGWRDAGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTFKSASSRQNAAEKLPWFIPNWTVMYIVNAFVVVWVFVLGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKIIPSKNHTITMYH* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1066 478 Pfam Transmembrane amino acid transporter protein 39 432 IPR013057 -
Ahy10g1066 478 PANTHER OS05G0424000 PROTEIN-RELATED 3 465 - -
Ahy10g1066 478 PANTHER AUXIN INFLUX TRANSPORTER 3 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1066 Ahy-Chr10 25019444 25025635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1066 1 462 Organic Solute Cotransporters AT2G21050 78.139 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1066 K13946 - gmx:100795466 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1439 20 36416924 36423296 Ahy10g1066 10 25019444 25025635 hybridization
Ahy10g1066 10 25019444 25025635 Ahy17g0966 17 11853215 11860377 PCT
Ahy10g1066 10 25019444 25025635 Ahy7g0792 7 9927167 9934474 PCT
Ahy17g0966 17 11853215 11860377 Ahy10g1066 10 25019444 25025635 PCT
Ahy7g0792 7 9927167 9934474 Ahy10g1066 10 25019444 25025635 PCT