Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1049 ATGGAGTGCTGCATACTTAACCGCCTTAAAACCCAACCGCTCTGGTTCGCACTCTTTTTCGGCCTCGGCGCCCTCACCCTCCTCCGTTTCCTCTTCCTCTTCCTCAGATGGGCCTACGTCAACTTCCTCAGGCCCGCTAAGAATCTCAAGAAATACGGATCCTGGGCCCTAGTAACCGGCCCAACCGACGGAATCGGAAAAGCCTTCGCCTTCCAGCTGGCACGTAACGGCCTCAACCTCGTCCTTGTCGGCCGAAGCCCTGACAAGCTCGCTGATGTCTCCGCCGCCATCACCGCCAAGTTCCCCAAAATCGATGTCAGAACCGTCGTTGTCGACTTCGCCGGCGATCTCGACGACGGCATGAGGAGGATCCAAGATGCAATTGAAGGATTGGACGTTGGTGTTCTTATCAACAACGTTGGGGTTTCTTACCCTTACGCTAGATTCTTCCACGAAGTGGATGAGGGGCTTTTGAGGAATTTGATTAGGGTTAACATTGAAGGAACCACTAAGGTTACGCAGACGGTTATTCCTGGCATGCTGAAGAGGAAGAAGGGTGCCATTGTTAATATTGGTTCTGGTGCCGCCATTGTTATACCTTCGGATCCGCTTTACGCTGTTTACGCTGCTTCCAAAGCGTACATTGATCAATTTTCCAGATCTTTGTATGTGGAGTACAAGAAGAGTGGAATTGATGTTCAGTGTCAGGTTCCATTATATGTGGCAACAAAGATGGCATCAATTAGAAGATCTTCATTCTTCGTCCCGTCAACTGATGGATATGCCAAAGCTGGTGTGAGATGGATAGGCTATGAACCTCGCTGCACACCATACTGGCCTCACACCATTCTCTGGGCCTTAGCATACTCATTGCCTGAGTCCATTGTTGATGCTTGGCGCCTGCGGTTTTGCCTCGGAATCCGAAAGAGGGGACAACAGAAAGATTCACAAAAGAAGAAGGAATAG 966 0.501 MECCILNRLKTQPLWFALFFGLGALTLLRFLFLFLRWAYVNFLRPAKNLKKYGSWALVTGPTDGIGKAFAFQLARNGLNLVLVGRSPDKLADVSAAITAKFPKIDVRTVVVDFAGDLDDGMRRIQDAIEGLDVGVLINNVGVSYPYARFFHEVDEGLLRNLIRVNIEGTTKVTQTVIPGMLKRKKGAIVNIGSGAAIVIPSDPLYAVYAASKAYIDQFSRSLYVEYKKSGIDVQCQVPLYVATKMASIRRSSFFVPSTDGYAKAGVRWIGYEPRCTPYWPHTILWALAYSLPESIVDAWRLRFCLGIRKRGQQKDSQKKKE* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1049 321 PANTHER RH59310P 4 320 - -
Ahy20g1049 321 Pfam short chain dehydrogenase 55 247 IPR002347 -
Ahy20g1049 321 PIRSF 11-beta-HSD1 4 314 - -
Ahy20g1049 321 PRINTS Glucose/ribitol dehydrogenase family signature 131 142 IPR002347 -
Ahy20g1049 321 PRINTS Glucose/ribitol dehydrogenase family signature 208 227 IPR002347 -
Ahy20g1049 321 PRINTS Glucose/ribitol dehydrogenase family signature 55 72 IPR002347 -
Ahy20g1049 321 PRINTS Glucose/ribitol dehydrogenase family signature 180 196 IPR002347 -
Ahy20g1049 321 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Ahy20g1049 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 310 IPR036291 -
Ahy20g1049 321 Gene3D - 48 266 - -
Ahy20g1049 321 PANTHER BETA-KETOACYL REDUCTASE 1-RELATED 4 320 - -
Ahy20g1049 321 CDD 17beta-HSD1_like_SDR_c 53 295 - -
Ahy20g1049 321 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 194 IPR002347 -
Ahy20g1049 321 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 142 IPR002347 -
Ahy20g1049 321 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 227 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1049 Ahy-Chr20 16106648 16109268 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1049 1 320 Lipid Metabolism Gene Families AT1G67730 62.187 4.12e-161 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1049 K10251 - jre:108990665 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1049 20 16106648 16109268 Ahy10g0755 10 9198424 9201011 hybridization
Ahy13g4055 13 139969971 139977210 Ahy20g1049 20 16106648 16109268 PCT
Ahy3g3776 3 137141520 137145095 Ahy20g1049 20 16106648 16109268 PCT