Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0193 ATGTCTCAGCCCTCAACGAAACGCTCGTCGCCGTCGCCGTCGCCGTCGCCAGCTGAAACAAACAGCTCTATGAAAAAAGCCAAGTCGCAAGGCCTCGCCTGTGCTCTTGACTCCAACGCCATCTCCTCTCACCACCACGACCTCCTTTTCGACTCCATGTCCCACAACGACCCCACCGCCGCCGCTTCCCCCTCTCCCTCCCCCTCCCCCAACAACCCTCGCGCTCCCGCCGCCAACCTTTCCCGCAAGAAAGCCACGCCTCCCCACCCCGCTAAGAAGCTCCTCATCAAGCTCCACAAAGGTAAGCCAACACTGCCCACAAATTTTGAGGAGGTTACATGGGCAAAATTGAAGTCTGCTATTTGTGCTATATTCTTGAAGCAACCTGACTCTTGTGATTTGGAAAAGCTTTATCAGGCTGTCAGTGATCTTTGCATATATAAAATGGCTGGAAATCTTTATCAGCGAATTGAAACGGAATGCGAAGCACATATATCTACAGCTTTGCAGTCTTTGGTTGGACAAAGCCCAGATTTGGTTGTTTTTCTATCTCTAGTTGAGAGATGTTGGCAGGATCTTTGTGACCAAATGTTGATGATTCGAGGTATAGCCTTGTATCTGGATAGGACATATGTGAAGCAAACAGCAAATGTACGGTCCTTATGGGACATGGGCTTACAACTTTTCCGCAAACATCTTTCATTATCTCCTGAAGTTGAACACAAAACTGTTACCGGTCTTCTAAGAATGATTGAAAGTGAAAGATTAGGTGAAGCAGTGGATAGAACGCTTCTAAACCATCTTTTGAAGATGTTCACAGCACTGGGAATATATGCAGAAAGCTTCGAGAAGCCATTTCTTGAATGCACATCTGAATTTTATGCTGCTGAAGGTATGAAATACATGCAGCAATCAGATGTTCCAGATTATTTGAAGCATGTGGAGACAAGATTGCAAGAGGAACATGACAGATGCCTGATCTACTTGGATGCGAGTACTAGGAAGCTGCTGATAGCCACAGCAGAAAAGCAACTTCTTGAACGTCATATACCTGCCATTCTTGATAAGGGTTTCTCTGTGCTTATGGATGGAAATCGCATTGAAGACCTTCAGAGAATGTACTCACTCTTTTTAAGGGTCAATGCCCTTGAGTCACTAAGACAAGCCCTAAGTTCATATATCAGGAGAACTGGGCAGGCCATTGTTATGGATGAGGAGAAAGATAAAGACATGGTTTCTTCACTTCTGGAGTTTAAGGCTTCTCTTGACAGAATATGGGAAGAAAGTTTTTATAAGAATGAAGTATTCTCTAACACCATTAAAGATTCATTTGAGCATCTTATCAATCTACGACAGAACCGACCAGCAGAGTTGATTGCCAAGTTCTTAGATGAGAAGCTCCGTGCAGGTAACAAGGGTACTTCTGAAGAGGAACTGGAGGGAACACTTGATAAAGTCCTGGTTTTATTTAGGTTCATTCAGGGCAAAGATGTGTTTGAAGCTTTTTATAAGAAAGATCTTGCAAAAAGACTTCTTTTGGGAAAAAGTGCTTCTATTGATGCAGAGAAGTCTATGATATCCAAGTTGAAGACTGAGTGTGGCAGTCAGTTCACAAACAAATTGGAAGGAATGTTTAAGGACATTGAATTATCAAAAGAAATAAATGAGTCCTTCAAACAGTCATCCCAAGCAAGGACAAAACTCCCATCAGGAATTGAAATGAGTGTTCATGTCCTGACAACTGGGTACTGGCCAACATATCCACCCATGGATGTTAGACTTCCTCATGAATTGAATGTTTACCAGGATATTTTCAAAGAGTTCTATCTTAGCAAATACAGTGGAAGGCGTTTGATGTGGCAAAATTCATTAGGTCACTGTGTCTTGAAGGCAGAGTTTCCTAAAGGGAAAAAGGAGTTGGCAGTCTCCCTATTTCAGACTGTTGTTTTGATGCTATTCAATGATGCCGAGAAACTGAGCTTTCAAGATATCAAGGACTCTACCAGTATCGAGGACAAAGAACTGAGAAGGACTCTGCAATCACTTGCATGTGGAAAAGTTCGTGTCCTACAGAAGTCGCCGAAGGGTAGAGATGTGGAGGATGATGACTCATTCTCTTTTAATGATGGCTTTACAGCTCCTCTTTACCGTATAAAGGTGAATGCCATTCAGTTGAAGGAGACAGTGGAGGAAAACACAAGCACCACTGAAAGAGTTTTCCAAGACCGTCAGTATCAGATTGATGCTGCCATTGTGAGGATAATGAAGACAAGGAAAGTACTTAGTCACACCCTTCTTATTACCGAACTCTTCCAACAGCTCAAGTTTCCAATAAAACCAGCTGATTTGAAGAAAAGGATTGAAAGCCTGATTGACAGAGAGTATCTGGAGAGGGACAAGAGCAACCCCCAAATATACAATTATCTGGCATAG 2433 0.4299 MSQPSTKRSSPSPSPSPAETNSSMKKAKSQGLACALDSNAISSHHHDLLFDSMSHNDPTAAASPSPSPSPNNPRAPAANLSRKKATPPHPAKKLLIKLHKGKPTLPTNFEEVTWAKLKSAICAIFLKQPDSCDLEKLYQAVSDLCIYKMAGNLYQRIETECEAHISTALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTANVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALGIYAESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHDRCLIYLDASTRKLLIATAEKQLLERHIPAILDKGFSVLMDGNRIEDLQRMYSLFLRVNALESLRQALSSYIRRTGQAIVMDEEKDKDMVSSLLEFKASLDRIWEESFYKNEVFSNTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTSIEDKELRRTLQSLACGKVRVLQKSPKGRDVEDDDSFSFNDGFTAPLYRIKVNAIQLKETVEENTSTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKSNPQIYNYLA* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0193 810 Gene3D Cullin Repeats 453 564 - -
Ahy20g0193 810 SMART Cullin_Nedd8_2 739 804 IPR019559 -
Ahy20g0193 810 Pfam Cullin family 114 711 IPR001373 GO:0006511|GO:0031625
Ahy20g0193 810 Gene3D - 737 810 IPR036388 -
Ahy20g0193 810 SUPERFAMILY Cullin homology domain 451 721 IPR036317 -
Ahy20g0193 810 ProSitePatterns Cullin family signature. 783 810 IPR016157 GO:0006511|GO:0031461|GO:0031625
Ahy20g0193 810 SUPERFAMILY "Winged helix" DNA-binding domain 722 810 IPR036390 -
Ahy20g0193 810 SUPERFAMILY Cullin repeat-like 108 450 IPR016159 -
Ahy20g0193 810 Gene3D Cullin; Chain C, Domain 2 569 724 - -
Ahy20g0193 810 MobiDBLite consensus disorder prediction 1 28 - -
Ahy20g0193 810 Gene3D Cullin Repeats 351 452 - -
Ahy20g0193 810 PANTHER CULLIN-4A 69 810 - -
Ahy20g0193 810 SMART cul_2 484 633 IPR016158 -
Ahy20g0193 810 MobiDBLite consensus disorder prediction 1 32 - -
Ahy20g0193 810 PANTHER CULLIN 69 810 IPR045093 -
Ahy20g0193 810 Gene3D Cullin Repeats 236 349 - -
Ahy20g0193 810 MobiDBLite consensus disorder prediction 47 89 - -
Ahy20g0193 810 Pfam Cullin protein neddylation domain 742 802 IPR019559 -
Ahy20g0193 810 Gene3D Cullin Repeats 101 232 - -
Ahy20g0193 810 ProSiteProfiles Cullin family profile. 454 683 IPR016158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0193 Ahy-Chr20 1707095 1714881 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0193 K10609 - zju:107406011 1388.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0193 20 1707095 1714881 Ahy20g0193 20 1707095 1714881 ECH
Ahy20g0193 20 1707095 1714881 Ahy10g0026 10 339430 347310 hybridization
Ahy20g0193 20 1707095 1714881 Ahy11g2539 11 141226796 141233953 PCT
Ahy20g0193 20 1707095 1714881 Ahy1g2387 1 101950477 101957170 PCT