Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0026 ATGTCTCAGCCCTCAACGAAACGCTCGTCGCCGTCGCCGTCGCCGTCGCCAGCTGAAACAAACAGCTCTATGAAAAAAGCCAAGTCGCAAGGCCTCGCCTGTGCTCTAGACTCCAACGCCATCTCCTCTCACCACCACGACCTCCTTTTCGACTCCATGTCCCACAACGACCCCACCGCCGCCGCTTCCCCCTCTCCCTCCCCCTCCCCCTCCCCCAACAACCCTCGCGCTCCCGCCGCCAACCTCTCCCGCAAGAAAGCCACGCCTCCCCACCCCGCTAAGAAGCTCCTCATCAAGCTCCACAAAGGTAAGCCAACACTGCCCACAAATTTTGAGGAGGTTACATGGGCAAAATTGAAGTCTGCTATTTGTGCTATATTCTTGAAGCAACCTGACTCTTGTGATTTGGAAAAGCTTTATCAGGCTGTCAGTGATCTTTGCATATATAAAATGGCTGGAAATCTTTATCAGCGAATTGAAACAGAATGCGAAGCACATATATCTACAGCTTTGCAGTCTTTGGTTGGTCAAAGCCCAGATTTGGTTGTTTTTCTATCTCTAGTTGAGAGATGTTGGCAGGATCTTTGTGACCAAATGTTGATGATTCGGGGTATAGCCTTGTATCTGGATAGGACATATGTGAAGCAAACAGCAAATGTACGGTCCTTATGGGACATGGGCTTACAACTTTTCCGCAAACATCTTTCATTATCTCCTGAAGTTGAACACAAAACTGTTACTGGTCTTCTAAGAATGATTGAAAGTGAAAGATTAGGTGAAGCAGTGGATAGAACGCTTCTAAACCATCTTTTGAAGATGTTCACAGCACTGGGAATATATGCAGAAAGCTTCGAGAAGCCATTTCTTGAATGCACATCTGAATTTTATGCTGCTGAAGGTATGAAATACATGCAGCAATCAGATGTTCCAGATTATTTGAAGCATGTGGAGACAAGATTGCAAGAGGAACACGACAGATGCCTGATCTACTTGGATGCGAGTACTAGGAAGCCGCTGATAGCCACAGCAGAAAAGCAACTTCTTGAACGTCATATACCTGCCATTCTTGATAAGGGTTTCTCTGTGCTTATGGATGGAAATCGCATTGAAGACCTTCAGAGAATGTACTCACTCTTTTTAAGGGTCAATGCCCTTGAGTCACTAAGACAAGCCCTAAGTTCATATATAAGGAGAACTGGGCAGGCCATTGTTATGGATGAGGAGAAAGATAAAGACATGGTTTCTTCACTTCTGGAGTTTAAGGCTTCTCTTGACAGAATATGGGAAGAAAGTTTTTATAAGAATGAAGTATTCTCTAACACCATTAAAGATTCATTTGAGCATCTTATCAATCTACGACAGAACCGACCAGCAGAGTTGATTGCCAAGTTCTTAGATGAGAAGCTCCGTGCAGGTAACAAGGGTACTTCTGAAGAGGAATTGGAGGGAACACTTGATAAAGTCCTGGTTTTATTTAGGTTCATTCAGGGCAAAGATGTGTTTGAAGCTTTTTATAAGAAAGATCTTGCAAAAAGACTGCTTTTGGGAAAAAGTGCTTCTATTGATGCAGAGAAGTCTATGATATCCAAGTTGAAGACTGAGTGTGGCAGTCAGTTCACAAACAAATTGGAAGGAATGTTTAAGGACATTGAATTATCAAAAGAAATAAATGAGTCCTTCAAACAGTCATCCCAAGCAAGGACAAAACTCCCATCAGGAATTGAAATGAGTGTTCATGTCCTGACAACTGGGTACTGGCCAACATATCCACCCATGGATGTTAGACTTCCTCATGAATTGAATGTTTACCAGGATATTTTCAAAGAGTTCTATCTGAGCAAATACAGTGGAAGGCGTTTGATGTGGCAAAATTCATTAGGTCACTGTGTCTTGAAGGCAGAGTTTCCTAAAGGGAAAAAGGAGTTGGCAGTCTCCCTATTTCAGACTGTTGTTTTGATGCTATTCAATGATGCCGAGAAACTGAGCTTTCAAGATATCAAGGACTCTACCAGTATCGAGGATAAAGAACTGAGAAGGACTCTGCAATCGCTTGCATGCGGAAAAGTTCGTGTCCTACAGAAGTCGCCGAAGGGTAGAGATGTGGAGGATGATGACTCATTCTCTTTTAATGATGGCTTTACAGCTCCTCTTTACCGTATAAAGGTGAATGCCATTCAGTTGAAGGAGACAGTGGAGGAAAACACAAGCACCACTGAAAGAGTTTTCCAAGACCGTCAGTATCAGATTGATGCTGCCATTGTGAGGATAATGAAGACGAGGAAAGTACTTAGTCACACCCTTCTTATTACCGAACTCTTCCAACAGCTCAAGTTTCCAATAAAACCAGCTGATTTGAAGAAAAGGATTGAAAGCCTGATTGACAGAGAGTATCTGGAGAGGGACAAGAGCAACCCTCAAATATACAATTATCTGGCATAG 2439 0.4321 MSQPSTKRSSPSPSPSPAETNSSMKKAKSQGLACALDSNAISSHHHDLLFDSMSHNDPTAAASPSPSPSPSPNNPRAPAANLSRKKATPPHPAKKLLIKLHKGKPTLPTNFEEVTWAKLKSAICAIFLKQPDSCDLEKLYQAVSDLCIYKMAGNLYQRIETECEAHISTALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTANVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALGIYAESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHDRCLIYLDASTRKPLIATAEKQLLERHIPAILDKGFSVLMDGNRIEDLQRMYSLFLRVNALESLRQALSSYIRRTGQAIVMDEEKDKDMVSSLLEFKASLDRIWEESFYKNEVFSNTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTSIEDKELRRTLQSLACGKVRVLQKSPKGRDVEDDDSFSFNDGFTAPLYRIKVNAIQLKETVEENTSTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKSNPQIYNYLA* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0026 812 PANTHER CULLIN-4A 71 812 - -
Ahy10g0026 812 Gene3D Cullin Repeats 238 351 - -
Ahy10g0026 812 Gene3D - 739 812 IPR036388 -
Ahy10g0026 812 SMART Cullin_Nedd8_2 741 806 IPR019559 -
Ahy10g0026 812 PANTHER CULLIN 71 812 IPR045093 -
Ahy10g0026 812 SUPERFAMILY Cullin repeat-like 110 452 IPR016159 -
Ahy10g0026 812 SUPERFAMILY Cullin homology domain 453 723 IPR036317 -
Ahy10g0026 812 ProSiteProfiles Cullin family profile. 456 685 IPR016158 -
Ahy10g0026 812 SUPERFAMILY "Winged helix" DNA-binding domain 724 812 IPR036390 -
Ahy10g0026 812 MobiDBLite consensus disorder prediction 1 28 - -
Ahy10g0026 812 Gene3D Cullin Repeats 353 454 - -
Ahy10g0026 812 ProSitePatterns Cullin family signature. 785 812 IPR016157 GO:0006511|GO:0031461|GO:0031625
Ahy10g0026 812 SMART cul_2 486 635 IPR016158 -
Ahy10g0026 812 Gene3D Cullin Repeats 455 566 - -
Ahy10g0026 812 Gene3D Cullin Repeats 103 234 - -
Ahy10g0026 812 MobiDBLite consensus disorder prediction 1 32 - -
Ahy10g0026 812 MobiDBLite consensus disorder prediction 47 91 - -
Ahy10g0026 812 Pfam Cullin family 116 713 IPR001373 GO:0006511|GO:0031625
Ahy10g0026 812 Pfam Cullin protein neddylation domain 744 804 IPR019559 -
Ahy10g0026 812 Gene3D Cullin; Chain C, Domain 2 571 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0026 Ahy-Chr10 339430 347310 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0026 K10609 - zju:107406011 1390.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0193 20 1707095 1714881 Ahy10g0026 10 339430 347310 hybridization
Ahy10g0026 10 339430 347310 Ahy11g2539 11 141226796 141233953 PCT
Ahy10g0026 10 339430 347310 Ahy1g2387 1 101950477 101957170 PCT