Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1900 ATGGGAACGTTTCAGAGTTGGAGAAGAGCCTACGGTGCTCTCAAGGATTCCACCAAGGTTGGCTTAGCCAAGGTCAATAGCGAATACAAGGAATTGGATATTGCAATTGTAAAAGCTACCAGTCACGTAGAATATCCTCCCAAGGAACGTCATGTTCGAAAAATATTCTATGCCACAGCAGCACATCAACCACGGGCAGATGTGGCATACTGCATACACACACTCTCCAAGAGACTTTCCAAGACAAGAAATTGGATAGTTGCCATAAAGACATTGATAGTTATCCATAGGATTTTGAGAGAGGGTGATCCTACTTTCAAAGAAGACCTTGTCAACTATTCAAGAAGGGGACACATTCTCCAAATATCCAATTTCAAAGATGACTCAAGCACCCTAGCTTGGGACTGTTCTGCATGGGTTAGAACCTATGCACTGTTTTTAGAAGAAAGGCTTGAATGTTATAGAGTCCTTAAGTATGACATAGAGTCAGATCGTTTAAAAAAACCGACACAAGGGCAGGGTTTAGCTAAGGTACAAAGCAGAACACGGTCATTGCCTACTGAAGATCTATTGGAGCAACTGCCTGCACTGCAGCAACTTCTATACCGCCTTATTAATTGTCGGCCTGATGGAGGAGCTTACAGCAATTACCTAGTGCAATATGCTTTGGCCCTGGTATTGAAAGAGAGCTTCAAAATATATTGTGCAGTCAATGATGGAATCATCAATCTTGTGGATGTGTTCTTTGATATGCAAAAACATGATGCCAGGAAGGCTTTGCTTATTTACAAGAGAGCTGGCCATCAGTGCGATCAACTTGCTAATTTCTATGAATACTGCAAGGGCTTGGATCTTGCTAGGAACTTCCAATTCCCAACTCTGAGACAGCCACCTTCCACTTTTCTTGGTACAATGGAAGAGTACATCAAGGAAGCACCAGAGGCAGGCATGCCTAGAAAGAACCCGGAGCCTAAGGAAAAGGAGGAATCATCCAAAGAAGAAGAACCAGAAACCGACGAGCACGAAGAGGACGAAGAGCCTCAAGAAAATGAGAAACAAGAAGAAGAAATCCAGGAAGAACCTGAACCACAACCCAAGGAACTAGAGAAGGCCGAACCTGCTCCTCTGATATCAACTGGTGATGATTTGCTGGGTCTACATGAAATAAATCCAAAAGCTAGAGAACTAGAGGAGACCAATGCTTTGGCACTTGCAATTGTACAACCTGGTGGAAACAACATTCCGAGGGATCTTGCATTGAGTAACATTGGTGGGACTACAGGTTGGGAACTTGCACTGGTTACGGCACCAAGTAACCATACCAGCCAAGCAATAGACCGAAAAATGGCTGGTGGATTTGATAGGCTACTACTAGAAAGCTTGTATGAAGATGAAAACTCCAGAAGACAACTTCAGCTCCAAAATGCAGGTTATGGATACGGAGGAACAGCTGTTCATAATCCATTTGATCAATATAATAGTAATCAGTATGATCCATTTGCAGTGTCCAACAACATAGCACCTCCAACCAATGTGCAATTGTCATTGATGGCTCAGCAACATCAACAGCAGCAAATGATGTTCCAACAGCAACAAATGATGTATCCACAACAACAACAACAACAACAGCAACAACAAATGATGTACCATCAAAATAACATGATGATGGTCCCATATCAGTCTCAATACCCTCAACAGATGCAATTTGTGGACTCTTCTAATCCATTTGGAGATCCCTTACCAGTTCCCACCTATCAACACACTTCCATGCAAGGAAATTACAATTTGTTGTAG 1794 0.4259 MGTFQSWRRAYGALKDSTKVGLAKVNSEYKELDIAIVKATSHVEYPPKERHVRKIFYATAAHQPRADVAYCIHTLSKRLSKTRNWIVAIKTLIVIHRILREGDPTFKEDLVNYSRRGHILQISNFKDDSSTLAWDCSAWVRTYALFLEERLECYRVLKYDIESDRLKKPTQGQGLAKVQSRTRSLPTEDLLEQLPALQQLLYRLINCRPDGGAYSNYLVQYALALVLKESFKIYCAVNDGIINLVDVFFDMQKHDARKALLIYKRAGHQCDQLANFYEYCKGLDLARNFQFPTLRQPPSTFLGTMEEYIKEAPEAGMPRKNPEPKEKEESSKEEEPETDEHEEDEEPQENEKQEEEIQEEPEPQPKELEKAEPAPLISTGDDLLGLHEINPKARELEETNALALAIVQPGGNNIPRDLALSNIGGTTGWELALVTAPSNHTSQAIDRKMAGGFDRLLLESLYEDENSRRQLQLQNAGYGYGGTAVHNPFDQYNSNQYDPFAVSNNIAPPTNVQLSLMAQQHQQQQMMFQQQQMMYPQQQQQQQQQQMMYHQNNMMMVPYQSQYPQQMQFVDSSNPFGDPLPVPTYQHTSMQGNYNLL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1900 597 MobiDBLite consensus disorder prediction 335 362 - -
Ahy1g1900 597 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 533 IPR045192 GO:0048268|GO:0072583
Ahy1g1900 597 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Ahy1g1900 597 MobiDBLite consensus disorder prediction 312 334 - -
Ahy1g1900 597 Gene3D ANTH domain 176 320 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Ahy1g1900 597 SUPERFAMILY GAT-like domain 180 311 - -
Ahy1g1900 597 MobiDBLite consensus disorder prediction 311 382 - -
Ahy1g1900 597 Gene3D - 8 161 IPR008942 -
Ahy1g1900 597 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Ahy1g1900 597 Pfam ANTH domain 31 311 IPR011417 GO:0005543
Ahy1g1900 597 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 533 - -
Ahy1g1900 597 SMART enth_2 30 161 IPR013809 -
Ahy1g1900 597 CDD ANTH_N 32 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1900 Ahy-Chr1 95652888 95656804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1900 K20044 - gmx:100786060 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3073 11 148381207 148385073 Ahy1g1900 1 95652888 95656804 hybridization
Ahy1g1900 1 95652888 95656804 Ahy14g1281 14 29718592 29726257 PCT
Ahy1g1900 1 95652888 95656804 Ahy4g1186 4 31775999 31783180 PCT
Ahy14g1281 14 29718592 29726257 Ahy1g1900 1 95652888 95656804 PCT
Ahy4g1186 4 31775999 31783180 Ahy1g1900 1 95652888 95656804 PCT