Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1281 ATGCGCACAATATTACATGCAACATCAGCAAGTCAACCAAGAGCAGATGTGGCATACTGCATTCACAAACTTTCCAAAAGGCTTTACAAGACAAAAAACTGGATAGTTGCTATAAAGACATTGATAGTGATGCATAGGTTATTGAGAGAGGGTGATCCTACTTTCAGAGAAGAGCTCCTAAACTACACACGCAGGGGACACTTTCTCCAAATATCCAATTTCAAAGATGACACCACTCCTCAAGCTTGGGATTGTTCTGCATGGGTTCGAACCTATGCACTTTTTCTACAAGAAAGACTTGAATGCTTTAGAACACTCAAATACGACATTGAAACAGAGCGTTTCGTAAAATCACCAACTTCTTCAGCTAAACCACTTACAAGAACTCGGTCTTTGGGTGCTGCAGAATTGTTGGAGCAGTTACCTGCATTGCAGCAACTCCTGCAACGCCTTATAGGTTGCCAGCCTGAAGGATGCGCTTATGGAAATTATCTTGTACAATATGCATTGGCCCTGGTATTGAAAGAGAGCTTCAAAATATATTGTTCATTGAATGATGGAATCATCAATCTTGTGGATGTGTTCTTTGATATGGAAAGACATAACGCAGTGAGGGCTCTGAAAATTTATAAAAGAGCTGGCCAACAGGCTGAGCATCTTGCTCAGTTTTATGAATACTGCAAAGGGTTGGAGATTGCAAGGAATTTCCAATTTCCATGTCTAAGACAGCCACCCCCCTCTTTCCTTGCAACAATGGAAGAATACATTGGAGAAGCACCACAAACTAGCTCTGTTCATCAAAGACTGGAATATCGTGAAGCTGATCTATCACCTTCTAGAGAAGATCCTCCAGAAACCGACGAGCCCGAAGAGCCTCAAGAAACTGAAGGAGAAGAAGAGAATGAGGAAGAACCAGTTGTCAACGGAGAGCCAAATCCTGTGGAAGTGGAAGAGGCTGCTCCGCTGATATCGAATAATTGGATCGATGATGACTTGCTGGGTCTGCGTGAAATAAACCCTCAAGCTGTTGAACTTGAAGAAAGAAATGCTTTGGCCCTTGCAATTGTACAACCTGGTGGAAATAATTCAAACAATCTTGCTTTGAACAACATTGGTGACACTACTGGTTGGGAACTAGCACTGGTTACAGCACAAAGCAACCATACTAGCCAAGCGCCAGATCGAAATATGGCTGGTGGATTTGACAAGTTATTACTAGATAGTTTATATGAAGATGAGAATGCAAGAAGACAACTCCAGCTCCAAAATGCAGGTTATGGATATGGTGGAAATGGAATGGCCATACAAAACCCATTTGAAAATGATAATGATCCATTTGCAGTGTCCAACAACATAGCACCCCCAACCAGTGTTCAATTGGCATTGCAACAACAGCAACAACAAACGCTGTTCCAACAACAACAGAACAATAACATGATGATGACGCCTTACCAGCAGCAACCATATTACAATCCATTTGGAGACCCTTTACCAGTGCCTAACTATGCATATGGTTCTACACCAGCACAGGGAAATTATAATTTAATGTAG 1551 0.4184 MRTILHATSASQPRADVAYCIHKLSKRLYKTKNWIVAIKTLIVMHRLLREGDPTFREELLNYTRRGHFLQISNFKDDTTPQAWDCSAWVRTYALFLQERLECFRTLKYDIETERFVKSPTSSAKPLTRTRSLGAAELLEQLPALQQLLQRLIGCQPEGCAYGNYLVQYALALVLKESFKIYCSLNDGIINLVDVFFDMERHNAVRALKIYKRAGQQAEHLAQFYEYCKGLEIARNFQFPCLRQPPPSFLATMEEYIGEAPQTSSVHQRLEYREADLSPSREDPPETDEPEEPQETEGEEENEEEPVVNGEPNPVEVEEAAPLISNNWIDDDLLGLREINPQAVELEERNALALAIVQPGGNNSNNLALNNIGDTTGWELALVTAQSNHTSQAPDRNMAGGFDKLLLDSLYEDENARRQLQLQNAGYGYGGNGMAIQNPFENDNDPFAVSNNIAPPTSVQLALQQQQQQTLFQQQQNNNMMMTPYQQQPYYNPFGDPLPVPNYAYGSTPAQGNYNLM* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1281 516 SMART enth_2 1 110 IPR013809 -
Ahy14g1281 516 Gene3D - 1 110 IPR008942 -
Ahy14g1281 516 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 2 501 - -
Ahy14g1281 516 CDD ANTH_N 1 103 - -
Ahy14g1281 516 MobiDBLite consensus disorder prediction 284 306 - -
Ahy14g1281 516 MobiDBLite consensus disorder prediction 268 283 - -
Ahy14g1281 516 Pfam ANTH domain 1 256 IPR011417 GO:0005543
Ahy14g1281 516 Gene3D ANTH domain 124 274 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Ahy14g1281 516 MobiDBLite consensus disorder prediction 259 312 - -
Ahy14g1281 516 PANTHER CLATHRIN ASSEMBLY PROTEIN 2 501 IPR045192 GO:0048268|GO:0072583
Ahy14g1281 516 SUPERFAMILY GAT-like domain 128 258 - -
Ahy14g1281 516 ProSiteProfiles ENTH domain profile. 1 110 IPR013809 -
Ahy14g1281 516 SUPERFAMILY ENTH/VHS domain 1 111 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1281 Ahy-Chr14 29718592 29726257 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1281 K20044 - gmx:100783084 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1281 14 29718592 29726257 Ahy4g1186 4 31775999 31783180 hybridization
Ahy11g3073 11 148381207 148385073 Ahy14g1281 14 29718592 29726257 PCT
Ahy1g1900 1 95652888 95656804 Ahy14g1281 14 29718592 29726257 PCT
Ahy14g1281 14 29718592 29726257 Ahy11g3073 11 148381207 148385073 PCT
Ahy14g1281 14 29718592 29726257 Ahy1g1900 1 95652888 95656804 PCT