Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2919 ATGGGGTGTGGAAAACTGAAGAGGTTTCTTGTTATGGTGTTGTTCATTGAACTTTTGGTGTGCTCAGTGGTGAGTGGAATTGGTGTTAACTGGGGAACACAAGCAACACACCCTTTGCCACCATCAACAGTGGTGAAAATGCTAAAAGACAATGGTATTCAGAAAGTGAAGCTTTTTGATGCTGACTCAAATATCTTAGAGGCTCTTAAGAAGACTCAGATCCAAGTCATGGTTGGTATCCCAAATGACATGCTTTACACACTTGCTAACAGTGTTCAAGCTGCTGAAAAATGGGTCTCAAAGAATATCTCAGCTCATATCTCATCTGGTGGAGTAGACATCAGGTATGTCGCCGTGGGAAATGAACCTTTCTTGTCAACTTACAATGGAACGTTCGAGTCCACAACCCTTCCGGCTCTTCAAAACATCCAGTCAGCTCTTGTGAAGGCTGGTTTGGGCAACAGGGTTAAAGTCACCACCCCTTTAAATGCTGATGTGTATCAAAGTTCGTCGGATAAACCTTCTGACGGTGACTTCAGGACAGACATCCATGATCTCATGATAAAAATTGTCAGTTTCTTGAGCCAGAACAATGCTCCATTCACTGTAAACATCTACCCTTTCATCAGCCTTTACGCCGATCCCAACTTCCCAATGGACTATGCCTTCTTCAATGGCTTCTCAAGTGCTATAAACGACAATGGAAAGATCTATGACAATGTCTTTGATGCTAACCATGATACTCTAGTATGGGCATTGCAGAAGAATGGCTTCGGAAACCTGCCCATTATTGTCGGAGAGATCGGGTGGCCTACAGATGGGGACCGGAATGCAAACCTTCAATATGCCCAACGCTTCAACCAAGGCTTCACGTCTAGATACCTTGGCGGAAAAGGTACTCCAATGAGGCCAGGTCCGATCGACGCCTACCTATTTAGCCTCATAGATGAAGATAGCAAAAGCATTCAGCCAGGTAACTTCGAACGCCACTGGGGATTGTTTTACTACGACGGAAAGCCAAAGTACCAACTCAGCCTTGGACCGACAAGTCCGAACGGCTTGGTAGCTGCTAGTGGCGTCGCATATCTTCCTAAAAAGTGGTGTATTATGAAGCCGTCGGCGAACCTCAACAGCGACCAAGTTGCGCCGAGTGTATCTTATGCGTGCCAAAATGCTGATTGCACTAGTCTTGGATATGGAACTTCATGTGGAAATTTGGATGTTCAAGGTAACATATCTTATGCATTTAATAGCTATTTTCAGGTGAATGATCAAATGGACAGTGCATGCAAATTCCCTGGACTTTCTGTTGTCACCGAGAGAGATCCTTCAGTGGGTGATTGCAAATTCAAAATCATGATCCAGACAGATTCTGCTGTCAGAATTGGTTCTGTTAGAATATTGCTATTTGTATTCTTGTTTTTAGGTATTGTTCTGTAA 1440 0.4389 MGCGKLKRFLVMVLFIELLVCSVVSGIGVNWGTQATHPLPPSTVVKMLKDNGIQKVKLFDADSNILEALKKTQIQVMVGIPNDMLYTLANSVQAAEKWVSKNISAHISSGGVDIRYVAVGNEPFLSTYNGTFESTTLPALQNIQSALVKAGLGNRVKVTTPLNADVYQSSSDKPSDGDFRTDIHDLMIKIVSFLSQNNAPFTVNIYPFISLYADPNFPMDYAFFNGFSSAINDNGKIYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFTSRYLGGKGTPMRPGPIDAYLFSLIDEDSKSIQPGNFERHWGLFYYDGKPKYQLSLGPTSPNGLVAASGVAYLPKKWCIMKPSANLNSDQVAPSVSYACQNADCTSLGYGTSCGNLDVQGNISYAFNSYFQVNDQMDSACKFPGLSVVTERDPSVGDCKFKIMIQTDSAVRIGSVRILLFVFLFLGIVL* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2919 479 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Ahy16g2919 479 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 458 IPR044965 GO:0004553|GO:0005975
Ahy16g2919 479 Pfam Glycosyl hydrolases family 17 27 345 IPR000490 GO:0004553|GO:0005975
Ahy16g2919 479 Pfam X8 domain 366 435 IPR012946 -
Ahy16g2919 479 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 15 458 - -
Ahy16g2919 479 Gene3D Glycosidases 26 349 - -
Ahy16g2919 479 SMART X8_cls 366 450 IPR012946 -
Ahy16g2919 479 Gene3D - 363 459 - -
Ahy16g2919 479 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2919 Ahy-Chr16 143494089 143497413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2919 9 479 Glycoside Hydrolase AT4G31140 69.247 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2919 K19893 - gmx:100775918 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2919 16 143494089 143497413 Ahy20g1925 20 107503130 107505038 PCT
Ahy16g2919 16 143494089 143497413 Ahy10g1505 10 86196389 86198284 PCT
Ahy18g2565 18 127514645 127518167 Ahy16g2919 16 143494089 143497413 PCT
Ahy8g2342 8 45776835 45780146 Ahy16g2919 16 143494089 143497413 PCT