Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2565 ATGGAAGGTGAAAAATCTAGTCTCTTTTTTGTTCTGTTGTTCTTGAATGTGATATGGTTAGTGGGTTCAGTGAGTGGAATTGGTGTTAACTGGGGAATACAATCAACACACCCTTTGCCACCATCCACAGTTGTGAAATTGCTGAAAGACAATGGAATTCAGAGGGTTAAGCTATTTGATGCTGATCCTGATATCTTGGATGCTATGAAGAAATCTGGGATGCAAGTTATGGTTGGAATCCCAAATGACATGCTTTATACACTTGCTAATAGTGTTCAAGCTGCTGAAAAATGGGTTTCAAAGAACGTTTCTGCGCATCTCTCTTCTGGAGGAGTTGACATCAGGTATGTTGCAGTGGGAAATGAACCATTCTTGTCAACATACAACGGTACTTATGAATCCACAACGCTTCCGGCTCTGCAAAACATTCAAGCAGCTCTGACGAAATCCGGTCTGAGCAACCGTGTCAAAGTAACTGTCCCTCTAAATGCAGATGTATACCAGAGCTCATCTGAGAAGCCTTCGGACGGAGACTTCCGGCCGGACATCCATGATCTCATGCTGCAGATTGTCAAGTTCTTGAGCCAAAATGGTGCACCATTTACTGTGAACATCTACCCTTTCATTAGCCTCTACTCTGACCCAAATTTCCCGGTAGACTATGCCTTCTTCAACGGCTACCAACCTGCCATCAATGACAATGGAAAAAACTATGACAATGTCTTTGATGCAAACCATGACACACTAGTTTGGGCCCTGCAGAAGAATGGTTTCACAAATGTCCCTATAATCATAGGCGAAATTGGTTGGCCTACTGATGGAGACAAGAATGCTAATCTTCAACTTGCGCAACGGTTCAACCAAGGCTTCGTGTCGCGCTACTATGTATCTCAAAAGGGTACTCCAATGAGGCCTGGTCCGGTCGATGCTTACTTGTTTAGCCTCATAGATGAAGATAACAAGAGCATTCGACCGGGTAACTTTGAGCGCCATTGGGGAATATTCTACTTTGATGGACAACCTAAGTACCAACTTAGCCTTGGACAATCGAAGGGGTTGGTAGCAGCTAGTGGTGTTGATTATCTGGCTAAGAAGTGGTGTGTGTTGAAGCCTTCTGCAAATCTTAATGATGACCAAGTTGCACCAAGTGTGGCATATGCTTGTGAAAATGCTGATTGTACTAGTCTTGGCTATGGAACTTCATGTGGTAACTTAGATGTTAAAGGTAACATATCTTATGCTTTCAATAGCTATTACCAGATTCATGATCAATTGGACAGTGCATGCAAATTCCCTGGCCTTTCTATGATCACTGATAAGGACCCTTCTGTTGGAACTTGCAAGTTTAGGATCATGATTCAGACAGATTCTGCTGAATGGATAGATGGGAGAACTTGGTTTCTAAGAAAAGTGTTCTTTGTGTTATTGTTTTATATTATTACTATTATTATGTAA 1455 0.4206 MEGEKSSLFFVLLFLNVIWLVGSVSGIGVNWGIQSTHPLPPSTVVKLLKDNGIQRVKLFDADPDILDAMKKSGMQVMVGIPNDMLYTLANSVQAAEKWVSKNVSAHLSSGGVDIRYVAVGNEPFLSTYNGTYESTTLPALQNIQAALTKSGLSNRVKVTVPLNADVYQSSSEKPSDGDFRPDIHDLMLQIVKFLSQNGAPFTVNIYPFISLYSDPNFPVDYAFFNGYQPAINDNGKNYDNVFDANHDTLVWALQKNGFTNVPIIIGEIGWPTDGDKNANLQLAQRFNQGFVSRYYVSQKGTPMRPGPVDAYLFSLIDEDNKSIRPGNFERHWGIFYFDGQPKYQLSLGQSKGLVAASGVDYLAKKWCVLKPSANLNDDQVAPSVAYACENADCTSLGYGTSCGNLDVKGNISYAFNSYYQIHDQLDSACKFPGLSMITDKDPSVGTCKFRIMIQTDSAEWIDGRTWFLRKVFFVLLFYIITIIM* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2565 484 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Ahy18g2565 484 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 19 458 - -
Ahy18g2565 484 SUPERFAMILY (Trans)glycosidases 27 346 IPR017853 -
Ahy18g2565 484 SMART X8_cls 365 449 IPR012946 -
Ahy18g2565 484 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 458 IPR044965 GO:0004553|GO:0005975
Ahy18g2565 484 Gene3D - 361 459 - -
Ahy18g2565 484 Pfam Glycosyl hydrolases family 17 27 346 IPR000490 GO:0004553|GO:0005975
Ahy18g2565 484 Pfam X8 domain 365 435 IPR012946 -
Ahy18g2565 484 Gene3D Glycosidases 26 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2565 Ahy-Chr18 127514645 127518167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2565 7 484 Glycoside Hydrolase AT4G31140 67.782 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2565 K19893 - gmx:100796552 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2565 18 127514645 127518167 Ahy8g2342 8 45776835 45780146 hybridization
Ahy18g2565 18 127514645 127518167 Ahy16g2919 16 143494089 143497413 PCT