Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1721 ATGCGGAGTTTCGTCGCCGTGTTGCTGGCCTTAACTGCTGTGGTGACGGCGGTGCCGGCAACGGTGGTGCTTCCGGGGAGCTATCTTCCCCTGGAACGCACCATTCCCCTGAACCGTCGCATGGAGCCGGAGGCGCTGAGAGCTCGCGACAGAGCACGCCACGCTCGAATCTTGCAAGGCGCAACTGTTGCCGGCGTTGTCGACTTCTCAGTCCAAGGAACCTCCGATCCTTACTTCGTTGGATTGTACTTTACAAAAGTGAAGATGGGTTCTCCTCCTAAGGAATTTAATGTCCAGATTGATACTGGGAGTGACATCTTGTGGGTTAATTGCAACAGATGCAGTAATTGTCCACAGTCTAGCGGGCTGGGGATTCAGCTCAATTTCTTTGATGCAGCCAGCTCATCCACTGCTGCACTGGTTTCCTGCTCGGACCCGATATGCACTTATGCGGTTCAAACTGCAACAAGTGAATGCTCCTCTCAGGTTAATCAGTGCAGCTACACCTTTCAGTATGGAGATGGAAGTGGTACAACTGGATATTATGTTTCCGATGCTATATATCTTGACACGATTGTGGGACAGTCTGTGCTTTCTAACTCATCATCTACCATCGTTTTTGGGTGTAGCACCTATCAATCTGGAGATTTGACTAAGACAGAAAAAGCAGTTGACGGAATTTTTGGATTTGGACCTGGTGCTCTATCTGTTATATCGCAGTTGTCATCAAAAGGCATGACCCCCAAAGTTTTCTCGCATTGCTTAAAAGGAGATGGCAATGGAGGAGGCATACTAGTTCTTGGTGAGATATTGGAGCCTGGCATTGTTTATACTCCACTTGTCCCATCACAGCCCCATTACAACTTAAATCTTCAGAGTATTGCTGTCAACGGACAGCTCCTCTCAATTGATCCAGCTGCATTTGGAACATCTAACAATCGGGGAACCATAGTTGACTCTGGTACAACATTGGCATACCTTATTCAAGAAGCTTATGATCCATTTGTCAATGCTATAACTACAACTGTGTCACAGTTTGCCAGACCCATTATTTCTAAAGGAAACCAGTGCTATCTGGTCCCAACCAGCATAGGTGATATATTTCCTTCAGTCAGTTTAAACTTTATCGGTGGAGCATCCATGGTTCTGAAACCAGAACAATACCTTATGCATTATGGTTTTCTTGATGGTGCTGCAATGTGGTGCATGGGTTTCCAGAAAGTGCAGGAGGGATTCACAATTTTAGGAGATCTTGTGCTGAAAGATAAGATTTTTGTATATGACTTGGCTAATGAGCGTATTGGATGGACAAACTATGACTGTTCCTTATCAGTAAACGTCTCAGTGGCTGCAACCAAGAGCAAAGATCAGTACATCAATGCAGGAACGCTGAGTGTCAGCAGCTCCCTCATAGGCCATGTATACAAGTTACTACCTGTAAGCATTGTGGTTCTCCTTGTCCACATGATAGTTTCCATGGTGTCCCCAATTTCGTGA 1497 0.4589 MRSFVAVLLALTAVVTAVPATVVLPGSYLPLERTIPLNRRMEPEALRARDRARHARILQGATVAGVVDFSVQGTSDPYFVGLYFTKVKMGSPPKEFNVQIDTGSDILWVNCNRCSNCPQSSGLGIQLNFFDAASSSTAALVSCSDPICTYAVQTATSECSSQVNQCSYTFQYGDGSGTTGYYVSDAIYLDTIVGQSVLSNSSSTIVFGCSTYQSGDLTKTEKAVDGIFGFGPGALSVISQLSSKGMTPKVFSHCLKGDGNGGGILVLGEILEPGIVYTPLVPSQPHYNLNLQSIAVNGQLLSIDPAAFGTSNNRGTIVDSGTTLAYLIQEAYDPFVNAITTTVSQFARPIISKGNQCYLVPTSIGDIFPSVSLNFIGGASMVLKPEQYLMHYGFLDGAAMWCMGFQKVQEGFTILGDLVLKDKIFVYDLANERIGWTNYDCSLSVNVSVAATKSKDQYINAGTLSVSSSLIGHVYKLLPVSIVVLLVHMIVSMVSPIS* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1721 498 Pfam Xylanase inhibitor C-terminal 286 437 IPR032799 -
Ahy16g1721 498 Pfam Xylanase inhibitor N-terminal 83 268 IPR032861 -
Ahy16g1721 498 Gene3D Acid Proteases 270 447 IPR021109 -
Ahy16g1721 498 SUPERFAMILY Acid proteases 78 444 IPR021109 -
Ahy16g1721 498 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Ahy16g1721 498 PRINTS Pepsin (A1) aspartic protease family signature 413 428 IPR001461 GO:0004190|GO:0006508
Ahy16g1721 498 PRINTS Pepsin (A1) aspartic protease family signature 316 327 IPR001461 GO:0004190|GO:0006508
Ahy16g1721 498 CDD pepsin_A_like_plant 83 441 IPR034161 -
Ahy16g1721 498 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 5 460 - -
Ahy16g1721 498 ProSiteProfiles Peptidase family A1 domain profile. 83 437 IPR033121 -
Ahy16g1721 498 PANTHER ASPARTYL PROTEASES 5 460 IPR001461 GO:0004190|GO:0006508
Ahy16g1721 498 Gene3D Acid Proteases 66 269 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1721 Ahy-Chr16 65874438 65878649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1721 67 442 Miscellaneous Gene Families AT1G44130 28.141 1.36e-41 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1721 - - gmx:100804147 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1721 16 65874438 65878649 Ahy16g1721 16 65874438 65878649 ECH
Ahy16g1721 16 65874438 65878649 Ahy6g1536 6 53215623 53219378 hybridization
Ahy16g1721 16 65874438 65878649 Ahy12g3003 12 119635156 119639426 PCT
Ahy16g1721 16 65874438 65878649 Ahy2g2588 2 102037231 102041501 PCT
Ahy12g3003 12 119635156 119639426 Ahy16g1721 16 65874438 65878649 PCT
Ahy2g2588 2 102037231 102041501 Ahy16g1721 16 65874438 65878649 PCT