Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2456 ATGGAAAATATAGTGAACATACTGGTTCCGTTTATTGTGCTGGCATATAACAACCCCTTTCTTCAACTTCTTATTCATGTTGCTATTGTGTTTGTTGTGTTGGAAATGATGATGTTAAACAAATTTGATGCTAATCAAAATCATGTAGCTGATATAAATAATGAAAATTTAGCTCCTTTTAAACTCTGCCATTACTGTTTTGTGAAGTTGGCGGATGGAAATTTGGTCTCTCTGAATTTAGGAGGTGCTGCTGAATTATTCACCATTCTACACTTTGGCAAGATTATGCAGCCGTATATCTGGCTTCAGACACCAGATGGTGCAATAAAACAAGTGGAACAGGAAATTGCAATGTTTTGCCCTTTTATTTGTCAAGAAGTAATACAAAAAGGCACAGGATCTTCAAAGAACTGTGCAATATGTCTTCCTCAACGAGTCACCCCTACTATTTTGAGCTTAATACTTGATTATTGCCGATTTCATCAAGTACCAGGTCGCTCAAACAAGGAGCGGAAGTCTTATGATGAGAAATTCATGCGGATGGACACGAAGCAGTTATGTGAGTTGACATCTGCTGCAGACAGCCTTCAGTTGAAACCATTGGTTGATCTTACCAGCCGTACACTTGCTCGAATAATTGAAGGAAAATCCCCTGAGGAAATACGCGGCATATTTAATTTGCCAGATGATCTTACAGAGGAAAAGAAATTGGAGCCCTTGAAAAACACAACTGTTGATCCGAGGATCAGGCTTGGAACCGCTTATCCAAAGGAGATGCAAAATTCTAAGAATAAAAATAAAAACCGAAGAAGAAAAGAGCAACAGACGAGCTCTTCTTTGAAGGAAGCTTCTGAACTGAACAATAAGGTAGTCATAATATCTAATATCAAATTTGGCTTCAAGTTAAATTTGAAAAAACAAGTTCAGTTATTTACTATATATGTTCCAAGTGTTTATTGCTTTTTACTTCTAATAGGAGATAAATGGCAAACTGATGGAACTAATGGAGTTTCCGAGGCCTCTCAGTCTAATACAGAAGACAGCACTTTTGTTCCTAGAGAGTTTGATGATGGAGATATAGATGAGGAGATCGATCCTGCATTAGAGGAAAAACTTGACAGGTGGGGCTAG 1131 0.3775 MENIVNILVPFIVLAYNNPFLQLLIHVAIVFVVLEMMMLNKFDANQNHVADINNENLAPFKLCHYCFVKLADGNLVSLNLGGAAELFTILHFGKIMQPYIWLQTPDGAIKQVEQEIAMFCPFICQEVIQKGTGSSKNCAICLPQRVTPTILSLILDYCRFHQVPGRSNKERKSYDEKFMRMDTKQLCELTSAADSLQLKPLVDLTSRTLARIIEGKSPEEIRGIFNLPDDLTEEKKLEPLKNTTVDPRIRLGTAYPKEMQNSKNKNKNRRRKEQQTSSSLKEASELNNKVVIISNIKFGFKLNLKKQVQLFTIYVPSVYCFLLLIGDKWQTDGTNGVSEASQSNTEDSTFVPREFDDGDIDEEIDPALEEKLDRWG* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2456 376 PANTHER SKP1-LIKE PROTEIN 20 94 250 - -
Ahy14g2456 376 MobiDBLite consensus disorder prediction 249 281 - -
Ahy14g2456 376 Gene3D Potassium Channel Kv1.1; Chain A 94 244 IPR011333 -
Ahy14g2456 376 Pfam Skp1 family, dimerisation domain 199 235 IPR016072 GO:0006511
Ahy14g2456 376 SMART skp1_3 97 198 IPR001232 GO:0006511
Ahy14g2456 376 Pfam Skp1 family, tetramerisation domain 99 162 IPR016073 GO:0006511
Ahy14g2456 376 SUPERFAMILY POZ domain 98 162 IPR011333 -
Ahy14g2456 376 SUPERFAMILY Skp1 dimerisation domain-like 172 242 IPR036296 GO:0006511
Ahy14g2456 376 MobiDBLite consensus disorder prediction 334 349 - -
Ahy14g2456 376 MobiDBLite consensus disorder prediction 334 376 - -
Ahy14g2456 376 PANTHER SKP1 94 250 IPR016897 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2456 Ahy-Chr14 129440868 129443925 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2456 - - ahf:112744136 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2456 14 129440868 129443925 Ahy14g2456 14 129440868 129443925 ECH
Ahy12g0066 12 1637371 1642747 Ahy14g2456 14 129440868 129443925 ECH
Ahy14g2456 14 129440868 129443925 Ahy4g2177 4 116932557 116938710 hybridization
Ahy14g2456 14 129440868 129443925 Ahy12g0066 12 1637371 1642747 PCT
Ahy14g2456 14 129440868 129443925 Ahy2g0028 2 285420 290793 PCT
Ahy12g0066 12 1637371 1642747 Ahy14g2456 14 129440868 129443925 PCT
Ahy2g0028 2 285420 290793 Ahy14g2456 14 129440868 129443925 PCT