Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0066 ATGTCAGAAATTGACATGGCCGTTATTAAACCTGAGATGATGAAGTCATATATTTGGCTTCAGACTTCTGATGGTTCAATCCAACAAGTCGAACAAGAAATCGCAATGTTTTGCCCACTGATATGTCAAGAAATAATAACAAAAGGCATGGGTTCGTCAAAGAATTCTGCAATATCTCTTCCTCAACAAGTCACCCCTTCTACGTTGAGCTTAATTCTTGATTATTGTCGCTTTCATCAAGTACCTGGCCGCTCAAACAAGGAACGGAAATCTCATGACGAGAAGTTCGTTAGGATGGGCACAAATAGGCTTTGTGAGTTGGTATCTGCTGCAGACAGCCTTCAGTTAAGGCCATTGGTTGATCTCATCAGTCGTGCACTTGCTCGAAAAATTGAAGGAAGAACACCGGAGGAGATACGTGAAATATTTCATCTGCCTGATGATCTTACAGAGGAAGAGAAGTTGGAGCCCTTGAAAAACATAACTGATGACCCAAGGATCAGACTTTTGAATCGTTTATATGCAAAAAAGAGGAAAGAACTAAAAGAGCGTGAAAGGTTAAAGAATGTCGAAATTGAAGAAGAGCGTGTAGATGAACGTTCAGTTGATGACCTTTTAACTTTCATTAATGGAAATGATAGAGATGCAAAGGCGGTTAAAACTTCAAAGAGTAAAAAGAAGAACCGGAAGAAAAAAGACCAACAGAAGAACTCTTCTTTGAAGGAAGATACTGCACTGGATAAGAAGGAGTTAAATGGGCATGATACCGGTGACCAAAGTTCTGATGGAAATATAATTGGCGAGACATCAAATTTACTGTACGAAGAGGATGGCTCCTTTTCTCCTAAGATTGACTTTGATGATGGAGATTTGGATGATGATGGGATTGAGCCTGCAATTAGGGAAAAAATTGACAGGGAGGTGGCAGATTTTGCTCGCAGAATAAATTCTGACTGGACAGAGAGGATGCAAGATTTTTTAACATCTGGGAGAGAGAGGACATCAACGTTTTCTGCTACCAATGGGAATGGTTATCTAAGGCGACATGCGTGA 1053 0.4027 MSEIDMAVIKPEMMKSYIWLQTSDGSIQQVEQEIAMFCPLICQEIITKGMGSSKNSAISLPQQVTPSTLSLILDYCRFHQVPGRSNKERKSHDEKFVRMGTNRLCELVSAADSLQLRPLVDLISRALARKIEGRTPEEIREIFHLPDDLTEEEKLEPLKNITDDPRIRLLNRLYAKKRKELKERERLKNVEIEEERVDERSVDDLLTFINGNDRDAKAVKTSKSKKKNRKKKDQQKNSSLKEDTALDKKELNGHDTGDQSSDGNIIGETSNLLYEEDGSFSPKIDFDDGDLDDDGIEPAIREKIDREVADFARRINSDWTERMQDFLTSGRERTSTFSATNGNGYLRRHA* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0066 350 MobiDBLite consensus disorder prediction 216 266 - -
Ahy12g0066 350 MobiDBLite consensus disorder prediction 235 256 - -
Ahy12g0066 350 Coils Coil 170 190 - -
Ahy12g0066 350 PANTHER SKP1-LIKE PROTEIN 20 1 279 - -
Ahy12g0066 350 Pfam Skp1 family, tetramerisation domain 18 80 IPR016073 GO:0006511
Ahy12g0066 350 Pfam Skp1 family, dimerisation domain 118 154 IPR016072 GO:0006511
Ahy12g0066 350 SMART skp1_3 15 116 IPR001232 GO:0006511
Ahy12g0066 350 PANTHER SKP1 1 279 IPR016897 GO:0006511
Ahy12g0066 350 SUPERFAMILY POZ domain 16 80 IPR011333 -
Ahy12g0066 350 SUPERFAMILY Skp1 dimerisation domain-like 91 160 IPR036296 GO:0006511
Ahy12g0066 350 Gene3D Potassium Channel Kv1.1; Chain A 12 162 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0066 Ahy-Chr12 1637371 1642747 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0066 - - gmx:100794666 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0066 12 1637371 1642747 Ahy12g0066 12 1637371 1642747 ECH
Ahy12g0066 12 1637371 1642747 Ahy14g2456 14 129440868 129443925 ECH
Ahy12g0066 12 1637371 1642747 Ahy2g0028 2 285420 290793 hybridization
Ahy14g2456 14 129440868 129443925 Ahy12g0066 12 1637371 1642747 PCT
Ahy4g2177 4 116932557 116938710 Ahy12g0066 12 1637371 1642747 PCT
Ahy12g0066 12 1637371 1642747 Ahy14g2456 14 129440868 129443925 PCT
Ahy12g0066 12 1637371 1642747 Ahy4g2177 4 116932557 116938710 PCT