Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4437 ATGGAAGTGGTGCCGTACCAGCTTTCTCGGTTGCCTTACCAGGATTCCCTCAAACTGCTTGAGGCTGATATACAGCACGCCAATGCTTTGGCTGCTGCAATTCCAAGAGCCAAAGGTGGGACTCTTCTCCAAATGAAATTGGTTTACAATCACTTGGCTCCTCTCCTTCTGTTGTTCTTGCAATGGATGGATTGTTCTTGCACATGCTTTCTACACAGTTATCTCAACTTGTTCCACATACTTGTGTACAAAGTTCATAATGATGGTAGATCAAGCATAACTTCTCATGCAAGGAAGGCAACCATAAGAGACTTTTATGCCGTTATTCTGCCGTCTCTCCAGCGGCTCCATGGAAGCTTGGATAAGTTGGAGATTTGTAAGGAAGGACACTCTTGCAACAATGGCAACAAGATTATTGAAGGTGATAGGAAACTGATCAATGTTGATTTGGAAAGAGAAGATGAATGTGGAATTTGCTTAGAGCCATGCACCAAAATGGTTTTGCCTAATTGCTGTCATGCCATGTGTATCAAATGCTACCGCAAGTGGAACACGCGGTCCGAGTCATGCCCGTTTTGCCGCGGCAGCTTGAGGAGAGTTAACTCTGAGGATCTATGGGTTCTGACCTGCAATGAGGATGTTGTTGATGCTGAAACTGTTTCAAAAGAGGACTTGCTGCGCTTCCATCTTTATATCAATAGCCTACCTAAAGATTACCCTGATGCACTATTTTTAATGTATTATGAATACTTAATTTGA 759 0.4308 MEVVPYQLSRLPYQDSLKLLEADIQHANALAAAIPRAKGGTLLQMKLVYNHLAPLLLLFLQWMDCSCTCFLHSYLNLFHILVYKVHNDGRSSITSHARKATIRDFYAVILPSLQRLHGSLDKLEICKEGHSCNNGNKIIEGDRKLINVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRKWNTRSESCPFCRGSLRRVNSEDLWVLTCNEDVVDAETVSKEDLLRFHLYINSLPKDYPDALFLMYYEYLI* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4437 252 ProSiteProfiles Zinc finger RING-type profile. 156 194 IPR001841 -
Ahy13g4437 252 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 252 - -
Ahy13g4437 252 PANTHER RING FINGER PROTEIN 41, 151 6 252 - -
Ahy13g4437 252 Pfam Ring finger domain 154 194 IPR001841 -
Ahy13g4437 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 205 IPR013083 -
Ahy13g4437 252 SUPERFAMILY RING/U-box 146 198 - -
Ahy13g4437 252 SMART ring_2 156 193 IPR001841 -
Ahy13g4437 252 ProSitePatterns Zinc finger RING-type signature. 171 180 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4437 Ahy-Chr13 144464843 144467113 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4437 - - gmx:100790422 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1039 20 15808065 15810356 Ahy13g4437 13 144464843 144467113 PCT
Ahy10g0749 10 9062319 9064578 Ahy13g4437 13 144464843 144467113 PCT
Ahy13g4437 13 144464843 144467113 Ahy20g1039 20 15808065 15810356 PCT
Ahy13g4437 13 144464843 144467113 Ahy10g0749 10 9062319 9064578 PCT