Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0749 ATGGAAATGATGCCATACCAGCTTTCCAGGTTACCTTACCATGATTCTCTCAAACTTCTGGAGGCTGATATACAGCATGCCAATTCTTTGGCTGCAGCAATTCCAGGAACAGAAGGTGGAACTGTTCTTCAAATGAAATTGGTTTATAATCACTTGGCTCCTTTGGTTCTCTTGTTTCTACAGTGGATGGATTGTTCCTGTGCTAGCTTTCTACATAGATATCTCAATCTCTTCCACATAGTTATATACAAGGTACACAATGATGGTAGAAACATGTCTAGTCATGGAAGGAAAGCTACCATAGGGGACTTTTATGCTGTTATATTGCCATCTCTCCAGCGGCTTCACGGTAGCTTGGAGAAGTTGGAGACTTCGAAAGAAGGCCAATCATTGAGCATGGAACATTCAAGTTATGGCAAGAAGATGATTGTTGAAGGTGATGGGAAACTAACCAATGTTGACTTGCAAAGAGAGGATGAATGTGATATTTGCTTAGAGCCTTGCACCAAAATGGTCCTGCCTAATTGTTGCCATGCCATGTGTATCCGGTGCTACCGCAAGTGGAACACCCGGTCGCAGTCTTGCCCTTTTTGCCGCGGCAGCTTGAGGAGGGTTAACTCTGAGGATCTTTGGGTGCTAACTTGCAATGAAGATGTTGTTGATGCTGAAACAGTTTCTAAGGAAGACTTGTGGCGTTTCTACCTTTATATCAATAAGCTACCAAAACATCACCCGGAAGCACTTTTTGTAATGTACTATGAATATCTCATTTGA 774 0.4251 MEMMPYQLSRLPYHDSLKLLEADIQHANSLAAAIPGTEGGTVLQMKLVYNHLAPLVLLFLQWMDCSCASFLHRYLNLFHIVIYKVHNDGRNMSSHGRKATIGDFYAVILPSLQRLHGSLEKLETSKEGQSLSMEHSSYGKKMIVEGDGKLTNVDLQREDECDICLEPCTKMVLPNCCHAMCIRCYRKWNTRSQSCPFCRGSLRRVNSEDLWVLTCNEDVVDAETVSKEDLWRFYLYINKLPKHHPEALFVMYYEYLI* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0749 257 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 257 - -
Ahy10g0749 257 Pfam Ring finger domain 159 199 IPR001841 -
Ahy10g0749 257 SMART ring_2 161 198 IPR001841 -
Ahy10g0749 257 SUPERFAMILY RING/U-box 152 203 - -
Ahy10g0749 257 ProSiteProfiles Zinc finger RING-type profile. 161 199 IPR001841 -
Ahy10g0749 257 ProSitePatterns Zinc finger RING-type signature. 176 185 IPR017907 -
Ahy10g0749 257 PANTHER RING FINGER PROTEIN 41, 151 6 257 - -
Ahy10g0749 257 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 210 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0749 Ahy-Chr10 9062319 9064578 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0749 - - gmx:100790422 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1039 20 15808065 15810356 Ahy10g0749 10 9062319 9064578 hybridization
Ahy10g0749 10 9062319 9064578 Ahy13g4437 13 144464843 144467113 PCT
Ahy13g4437 13 144464843 144467113 Ahy10g0749 10 9062319 9064578 PCT