Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3975 ATGGATAGAGAAGGTGGAAAGGGATCTCTGGAGCCTCTCTTGGAAAAGATCACAGTGGAAAGTAGGCTCAAGGTTGATGATATTGAACTAAAGAAGCACAAGGCAATAGAAAGAAGAGAAATCTTTGAAGAGGCAAGAAAGCAGTTATGGCTGGCAGGTCCTTTAGTAACCGTCTCTCTGCTCAATTATGGCCTGCAAGTCATATCTGTTATGTTCGTGGGTCATCTCGGTCAACTCCCTCTTTCCGGTGCTTCAATGGCTACTTCTTTTGCCTCTGTCACCGGTTTTAGCTTATTGATGGGAATGGCAAGTGCCTTGGACACTTTCTGTGGGCAGTCATATGGAGCAAAGCAGCATGGTATGGTAGGCATACATATGCAGAGAGCCATGCTCATTCTCATGATTCTTTGCATACCCCTTTCAATTATTTGGGCAAACACAGCATCCATTCTAACTGCTCTTGGCCAAGATCCTCAAATATCTTCAGAAGCTGGACAATATGCAAAGTTTATGATTCCGAGTCTTTTCGCCTATGGTCTCCTGCAGTGCCTCAACAGGTTCTTGCAAACCCAAAGTCTTGTGTTTCCAATGCTGTTCAGCTCTGGAGTTACCACTTTGCTGCATATTCTTATATGTTGGACTATGGTATTCAAATCCGGGCTGGGGAACAAAGGAGCTGCCATAGCAAATGCTATATCATACTGGTTGAATGTCTTCATCCTGATGCTCTATGTCAAGTTCTCGCCTTCATGTTTGAAAACATGGACTGGCTTTTCAAGAGAAGCATTCCATAACATCCCTTCTTTTATGAGGCTTGCCATTCCTTCAGCCGTTATGGTTTGCCTGGAATCATGGTCCTTTGAAATGATGGTTCTCCTTTCTGGCCTTCTCCCAAATCCCAAGTTAGAAACATCGGTGCTTTCTATCTGTTTGAACACTTCAACAACTGTTTGGACAATCCCATTTGGACTCAGCGGAGCAGTGAGCACTCGTGTCTCGAATGAACTAGGAGCAGGTCATCCAAGGGCTGCACGTTTAGCTGTGTATTTCGTCTTTGCAATGGCCATGGTTGAAGGCATCTTTGTTGGGGCAATGATGATTTTGATACGCAATATCTGGGGCTATGCATATAGTAATGAAGAAGAAGTGGTCACATATGTAGCAACCATGTTGCCTATTCTGGCAACATCCATTTTCCTGGATTCACTTCAATGTGTTCTTTCAGGTACGGCTAGAGGATGTGGTTGGCAAAAAATGGGTGCTCTGATCAATCTAGGATCATACTATTTAATTGGGATACCCGCAGCTATCTTATTCGCTTTTGTATTTCACATGGGTGGCAAGGGGCTTTGGCTGGGGATCATATGTGCACTCATTGTTCAAGTGTCATGTCTTCTTATCATTACAATACCCACTGATTGGGAGCAAGAGGCAAAGAAGGCTAAAGACAGTGTCCGTGTGTATGACAGCATATTGTCATGA 1482 0.4393 MDREGGKGSLEPLLEKITVESRLKVDDIELKKHKAIERREIFEEARKQLWLAGPLVTVSLLNYGLQVISVMFVGHLGQLPLSGASMATSFASVTGFSLLMGMASALDTFCGQSYGAKQHGMVGIHMQRAMLILMILCIPLSIIWANTASILTALGQDPQISSEAGQYAKFMIPSLFAYGLLQCLNRFLQTQSLVFPMLFSSGVTTLLHILICWTMVFKSGLGNKGAAIANAISYWLNVFILMLYVKFSPSCLKTWTGFSREAFHNIPSFMRLAIPSAVMVCLESWSFEMMVLLSGLLPNPKLETSVLSICLNTSTTVWTIPFGLSGAVSTRVSNELGAGHPRAARLAVYFVFAMAMVEGIFVGAMMILIRNIWGYAYSNEEEVVTYVATMLPILATSIFLDSLQCVLSGTARGCGWQKMGALINLGSYYLIGIPAAILFAFVFHMGGKGLWLGIICALIVQVSCLLIITIPTDWEQEAKKAKDSVRVYDSILS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3975 493 TIGRFAM matE: MATE efflux family protein 54 451 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy13g3975 493 CDD MATE_eukaryotic 44 480 IPR045069 GO:0042910|GO:1990961
Ahy13g3975 493 Pfam MatE 275 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy13g3975 493 Pfam MatE 54 214 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy13g3975 493 PANTHER MULTIDRUG RESISTANCE PROTEIN 27 484 - -
Ahy13g3975 493 PANTHER PROTEIN DETOXIFICATION 27 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3975 Ahy-Chr13 139166135 139169629 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3975 K03327 - gmx:100792588 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3975 13 139166135 139169629 Ahy3g3702 3 136375508 136379519 hybridization
Ahy13g3975 13 139166135 139169629 Ahy15g2683 15 143140959 143145569 PCT
Ahy5g2547 5 101051959 101056424 Ahy13g3975 13 139166135 139169629 PCT