Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2683 ATGGAGAGAGAAGAACACCAAAAGGCGTCTCTCCATTCTCCTTTGGTTCAAGATTGGGGAGAGCAGGACAAAACAAAATCAATAGAAAAGAGTGAGGTACTTGAAGAAGTGAAGAAGCAGCTATGGCTATCAGGGCCTTTGGTATCTGTGAGCTTGCTCAATTATTGCCTGCAAGTCATATCTGTCATGTTTGTTGGTCATCTCGGCGAGTTGCCGCTTTCCGGCGCTTCAATGGCCACTTCTTTTGCCTCTGTCACAGGTTTTAGCTTATTGGTGGGAATGGCTAGTGCCTTGGACACCTTATGTGGGCAATCATATGGAGCAAAACAGCACAGAATGTTAGGCATACACATGCAGAGAGCAATGCTGATTCTCATGATTGTCAGCGTTCCGCTCGCGGTTATTTGGATCAACACAAGATCAATTCTGATGTTTCTTGGCCAAGATCCTGAGATTTCTACAGAAGCAGGAAGCTATGCTCAGTTAATGGTTCCAAGCCTGTTTGCTTATGGCCTTCTTCAGTGCCTAAACAGATTCTTGCAAACACAGAACATAGTGTTTCCAATGGTGTTCTGCTCTGGAATCACTACTTTGCTACATGTCCTTATTTGTTGGATTATGGTGTTCAAATCTGGATTGGGGAGTAGAGGAGCTGCCATAGCAAATTCTATATCTTATTGGATCAATGTTTTATTGCTCTCACTTTATGTCAAGCTTTCTCCTTCTTGTGCAAGGACTTGGTCAGGGTTTTCTAAAGAGGCATTTCAAAATATTCCCTCATTTCTTAGGCTTGCAATTCCTTCAGCTGTTATGGTTTGCTTGGAAATGTGGTCATTTGAAATGATGGTTCTCCTTTCCGGTCTTCTTCCAAATCCACAATTGGAGACATCAGTTCTTTCTATTTGCTTGAATACAGCAGCAGCAGTTTGGATGATACCCTTTGGACTCAGTGGAGCTGTAAGTAACGAAGGCGAAGTGGTCGATTATGTTGCAGTTATGCTGCCAATTCTTGCAACATCCAACTTTCTTGATGGGCTCCAATGTGTTCTTTCAGGCACTGCTAGAGGATGTGGTTGGCAGAAAATTGGCGCATATGTGAATCTGGGATCATACTACTTAGTTGGGATTCCATCAGCTATTCTCTTGGCTTTTACGTTTCATATTGGCGGCAAGGGGTTATGGCTAGGGATCATATGTGCACTAATTGTTCAAGTACTTTCTCTACTGACCATTACTATAAGAACTGATTGGGACCAAGAGGCAAAGAAGGCTACAGATAGAGTCTTTGATTCAATCACACCAGACAGTATAGTCTCATGA 1320 0.428 MEREEHQKASLHSPLVQDWGEQDKTKSIEKSEVLEEVKKQLWLSGPLVSVSLLNYCLQVISVMFVGHLGELPLSGASMATSFASVTGFSLLVGMASALDTLCGQSYGAKQHRMLGIHMQRAMLILMIVSVPLAVIWINTRSILMFLGQDPEISTEAGSYAQLMVPSLFAYGLLQCLNRFLQTQNIVFPMVFCSGITTLLHVLICWIMVFKSGLGSRGAAIANSISYWINVLLLSLYVKLSPSCARTWSGFSKEAFQNIPSFLRLAIPSAVMVCLEMWSFEMMVLLSGLLPNPQLETSVLSICLNTAAAVWMIPFGLSGAVSNEGEVVDYVAVMLPILATSNFLDGLQCVLSGTARGCGWQKIGAYVNLGSYYLVGIPSAILLAFTFHIGGKGLWLGIICALIVQVLSLLTITIRTDWDQEAKKATDRVFDSITPDSIVS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2683 439 Pfam MatE 46 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy15g2683 439 Pfam MatE 321 380 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy15g2683 439 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 321 - -
Ahy15g2683 439 PANTHER MULTIDRUG RESISTANCE PROTEIN 320 427 - -
Ahy15g2683 439 PANTHER PROTEIN DETOXIFICATION 21 321 - -
Ahy15g2683 439 PANTHER PROTEIN DETOXIFICATION 320 427 - -
Ahy15g2683 439 TIGRFAM matE: MATE efflux family protein 46 321 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy15g2683 439 CDD MATE_eukaryotic 36 423 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2683 Ahy-Chr15 143140959 143145569 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2683 K03327 - gmx:100815319 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2683 15 143140959 143145569 Ahy15g2683 15 143140959 143145569 ECH
Ahy13g3975 13 139166135 139169629 Ahy15g2683 15 143140959 143145569 PCT
Ahy3g3702 3 136375508 136379519 Ahy15g2683 15 143140959 143145569 PCT