Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2547 ATGGAGAGAGAAGAACACCAAAAGGCGTCTCTCCATTCTCCTTTGATTCAAGATTGTGCAGAGCAGAACAAAGCAAAATCAATAGAAAAGAGTGAGGTAGTTGAAGAAGTGAAGAAGCAGCTATGGCTATCAGGGCCTTTGGTATCTGTGAGCTTGCTCAATTATTGCCTGCAAGTCATATCTGTCATGTTTGTTGGTCATCTCGGTGAGTTGGCGCTTTCCGGCGCTTCAATGGCCACTTCTTTTGCCTCTGTTACAGGTTTTAGCTTATTGGTGGGAATGGCTAGTGCCTTGGACACCTTATGTGGGCAATCATATGGAGCAAAACAGCACAGAATGTTAGGCATACACATGCAGAGAGCAATGCTGATTCTCATGATTGTGAGCGTTCCGCTCGCGGTTATTTGGATCAACACAAGATCAATTCTGATGTTTCTTGGCCAAGATCCTGAGATTTCTACGGAAGCAGGAAGCTATGCTCAGTTAATGGTTCCAAGCCTTTTTGCTTATGGCCTTCTTCAGTGCCTAAACAGATTCTTGCAAACACAGAACATAGTGTTTCCAATGGTGTTCTGCTCTGGAATCACTACTTTGCTACATGTCCTTATTTGTTGGATTATGGTGTTCAAATCTGGATTGGGGAGTAGAGGAGCTGCCATAGCAAATTCTATATCTTATTGGATCAATGTTTTATTGCTCTCACTTTATGTCAAGTTTTCTCCTTCTTGTGCAAGGACTTGGTCAGGGTTTTCTAAAGAGGCATTTCAAAATATTCCCTCATTTCTTAGGCTTGCAATTCCTTCAGCTGTTATGGTTTGCTTGGAAATGTGGTCATTTGAAATGATGGTTCTCCTTTCCGGTCTTCTTCCAAATCCACAATTGGAGACATCAGTTCTTTCTATTTGCTTGAATACAGCAGCAGCAGTTTGGATGATACCCTTTGGACTCAGTGGAGCTGTAAGCACTCGCGTCTCGAATGAACTTGGAGCTGGTAATCCCAGGACTGCACGCTTAGCAGTGTGTGTTGTGTTAGTAATGGCCATTATTGAGGGACTCATAGTTGGATTAGTGCTAATATTAATTCGCCATGTTTGGGGCTATGCGTATAGTAACGAAGGCGAAGTGGTCGATTATGTTGCAGTTATGCTGCCAATTCTTGCAACATCCAACTTTCTTGATGGACTCCAATGTGTTCTTTCAGGCACTGCTAGAGGATGTGGTTGGCAGAAAATTGGCGCATATGTGAATCTGGGATCATACTACTTAGTTGGGATTCCATCAGCTATTCTCTTGGCTTTTACATTTCATATTGGCGGCAAGGGGTTATGGCTAGGGATCATATGTGCACTAATTGTTCAAGTACTTTCTCTACTGACCATTACTATAAGAACTGATTGGGACCAAGAGGCAAAGAAGGCTACAGATAGAGTCTTTGATTCAATCACACCAGACAGTATAGTCTCATGA 1467 0.426 MEREEHQKASLHSPLIQDCAEQNKAKSIEKSEVVEEVKKQLWLSGPLVSVSLLNYCLQVISVMFVGHLGELALSGASMATSFASVTGFSLLVGMASALDTLCGQSYGAKQHRMLGIHMQRAMLILMIVSVPLAVIWINTRSILMFLGQDPEISTEAGSYAQLMVPSLFAYGLLQCLNRFLQTQNIVFPMVFCSGITTLLHVLICWIMVFKSGLGSRGAAIANSISYWINVLLLSLYVKFSPSCARTWSGFSKEAFQNIPSFLRLAIPSAVMVCLEMWSFEMMVLLSGLLPNPQLETSVLSICLNTAAAVWMIPFGLSGAVSTRVSNELGAGNPRTARLAVCVVLVMAIIEGLIVGLVLILIRHVWGYAYSNEGEVVDYVAVMLPILATSNFLDGLQCVLSGTARGCGWQKIGAYVNLGSYYLVGIPSAILLAFTFHIGGKGLWLGIICALIVQVLSLLTITIRTDWDQEAKKATDRVFDSITPDSIVS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2547 488 Pfam MatE 267 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy5g2547 488 Pfam MatE 46 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy5g2547 488 PANTHER PROTEIN DETOXIFICATION 19 476 - -
Ahy5g2547 488 CDD MATE_eukaryotic 36 472 IPR045069 GO:0042910|GO:1990961
Ahy5g2547 488 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 476 - -
Ahy5g2547 488 TIGRFAM matE: MATE efflux family protein 46 443 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2547 Ahy-Chr5 101051959 101056424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2547 K03327 - gmx:100815319 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g2547 5 101051959 101056424 Ahy13g3975 13 139166135 139169629 PCT
Ahy5g2547 5 101051959 101056424 Ahy3g3702 3 136375508 136379519 PCT