Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1438 ATGCAGTTTTTTCACAAACCTACCAAGGTTCAGTCTCTGATTAATTTCATTCTAGTCACTAGTTCATTTTGTGGCATATATGTTCTTGTATCAGTGTTGTTCTTGGGAACATCAAAGCTAGTACAATTTCATTCTTCATCAAAATACGTGTCAACACCAACACAAACAACTCTTGATCATGTTGTGTTTGGGATTGCATCAAGCAAAGGATCATGGCCTAAGAGAAAAGAGTTTGTTAAATTGTGGTGGAAACCAAACAATTCAATGAAGGGTTGTGTGTTCTTGGATACACTACCAGATGAAGAGAAGCAAGGTAGGGATGATAAGAATTCCCTCCCTCCTCTCTGCGTCTCTCAAGACACTTCCCGGTTTCGCTACACGTGCCACGGTGGCCTGAGGTCAGCCATACGCGTGGCACGTGTAGTTGCCGAGACAGTGGCCTTGAACCATTCAAACGTGAGGTGGTATGTGTTCGGCGACGACGACACCGTCTTCTTCCCGGAGAATGTGGTGAAGACACTTTCTAAGTATGATCATGAGCTATGGTACTATATTGGTTCGCACTCTGAGGTTTATGAGCAGAATAGGTTGTTTGGTTTTGGAATGGCTTTTGGCGGCGCTGGTTTTGCCATCAGTTCTTCCCTTGCAAAGGTTTTAGCCAAGGTTTTTGATTCTTGTATTCAAAGATACCATTTTCTCTATGGTAGTGATGGCAGGGTGTATTCTTGCTTAGCTGAACTTGGTGTTGGATTAACACATGAACCAGGTTTTCACCAGGTGGATTTGCGCGGAAATACCTTTGGCTTATTGGCTGCACATCCAGTGTCTCCATTGTTGTCCTTGCATCATCCAGAATACACTGATCCAATCTTTCCAAACATGACAACTACACAAGCTTTGAGACATTTCTTTGGAGCAGTGAAGGTTGATTCTCAGAGGATGCTGCAACAAACAGTCTGCTATAACAGCAGGTTTTCGTGGACGATTTCCGTGTCTTGGGGATACACGGTTCAGGTTTTCCCTAACCATATGCCATTGAGAGAAGTTATCAAGGTTCAAGAAACATTCAGGCAGTGGAGAAAGGGAAACTTGTTGGCCAAGTCATTTACTTTCAACACTGTAGAGCCTCACCATGATCCATGTAAAAGGCCAACCATTTTCTTTCTTGATAGTGTTTCTTCCGGAAAAGATGGCATCATAAGCAGTTACAAGAGATCTTTCAGAAATTGCTCGAGCGATGCATCGTCACTAATGAGGTTGGAATCGATCAAAGTGGTCTCCGATAAGCTCGATCTTGGCATCAAACAGTTGAAGGCTCCAAGGAGGCACTGCTGTGATGTATTGCCATCAAGTGGTGGTGACCAGATGGAAATTGAAGTCAGAGAATGCAAAGATGAAGAATTGATTTATATGCACTGA 1419 0.432 MQFFHKPTKVQSLINFILVTSSFCGIYVLVSVLFLGTSKLVQFHSSSKYVSTPTQTTLDHVVFGIASSKGSWPKRKEFVKLWWKPNNSMKGCVFLDTLPDEEKQGRDDKNSLPPLCVSQDTSRFRYTCHGGLRSAIRVARVVAETVALNHSNVRWYVFGDDDTVFFPENVVKTLSKYDHELWYYIGSHSEVYEQNRLFGFGMAFGGAGFAISSSLAKVLAKVFDSCIQRYHFLYGSDGRVYSCLAELGVGLTHEPGFHQVDLRGNTFGLLAAHPVSPLLSLHHPEYTDPIFPNMTTTQALRHFFGAVKVDSQRMLQQTVCYNSRFSWTISVSWGYTVQVFPNHMPLREVIKVQETFRQWRKGNLLAKSFTFNTVEPHHDPCKRPTIFFLDSVSSGKDGIISSYKRSFRNCSSDASSLMRLESIKVVSDKLDLGIKQLKAPRRHCCDVLPSSGGDQMEIEVRECKDEELIYMH* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1438 472 Pfam Protein of unknown function, DUF604 194 445 IPR006740 -
Ahy13g1438 472 Gene3D - 49 304 - -
Ahy13g1438 472 PANTHER FRINGE-RELATED 9 470 - -
Ahy13g1438 472 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 9 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1438 Ahy-Chr13 18428261 18430917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1438 10 437 Glycosyltransferase AT1G05280 53.333 4.89e-159 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1438 - - gmx:100784602 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1438 13 18428261 18430917 Ahy13g1438 13 18428261 18430917 ECH
Ahy18g0759 18 8357782 8360056 Ahy13g1438 13 18428261 18430917 PCT
Ahy8g1540 8 32198970 32201231 Ahy13g1438 13 18428261 18430917 PCT
Ahy13g1438 13 18428261 18430917 Ahy18g0760 18 8363825 8368147 PCT
Ahy13g1438 13 18428261 18430917 Ahy8g1541 8 32204651 32208397 PCT