LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy8g1541	ATGCAGAACAATAACATAAAAATGCAGCAGCATCTGATGATGATTCAGAAAAGCACCAACAAGAGCAAAAGCCAATCTCTGAGAAACTTGATTCTATTACTCTCAACTTCATTTTGTGTCACTTATTACATCCTTGTATCAACTCAGCTTCTAGACACACCAAAGCAAATACTACAACACTTGAATAACAACTACTCTTCAAAACTATCATCATCATTACAAGAACATTATCCTTCAACCACTATTGACCATGTCGTGTTTGGAATCGCCTCCAGTGGAGATTCATGGCCTAAGAGAAAACAATACACAAAGCTCTGGTGGAACAATAAAACAATGAAGGGGTGTGTATTCGTGGACAAAACGCCAATCGAGAATGGTAATGACTCTTCTTCTCTTCCTCCTCTGTGTGTCTCTGAAGACACTTCCCGGTTTAAGTACAGTTACCGGGGCGGTCTTCGATCGGCAATCCGCGTGGCGCGTGTGCTCAAGGAGACAGTGGCATTGAATCATTCGGGTGTGAGGTGGTATGTGTTTGGTGACGACGACACGGTGTTCTTGCCGGAGAATCTGGTGAAGACGCTGTCCAAGTATGATGATAGGCTTTGGTACTACATAGGGTCGAATTCGGAGAGTTATAAACAGAAGTGGTTCTTTGGTTTTGACATGGCATATGGTGGAGCTGGTTTTGCTATAAGTGGTTCTCTGGCGAAGGTGTTGGCGAAGGTGTTTGATGAATGCATTCAACGGTATCCGCATGTGTATGGGAGTGATGGCAGAGTCTACTCTTGTGTCACTGAACTTGGTCTTGCTTTAACACTTGAACCCGGTTTTCATCAGGTTGATTTGCGAAGAAATGCATTTGGGCTATTGGCTTCACACCCCTTAACTCCCTTGGTGTCTCTCCACCATCCTGATTACATTGATCCAATCTTTCCCAACATCAACACCACGCGTGCAAAATCTCTTGAGCATTTATTCCAAGCTGTCAATGTTGATTCCCAGAGGATCCTACAACAAACTGTGTGCTATCACAAGCGCTTTTCATGGACTATTTCTGTCTCATGGGGCTATGCTGTTCAGGTATACCAGCATCCTATGTTACTAACAGATGTTCTTAGAGTTCAAGGAACATTCAAACATTGGTCTGGGGGAGATGTTCTCTCACCACTCTACACTTTCAACACTAGAGGATTTCACCCTCATCCGTGTAAGAGGCCTACCATTTTCTATCTTCAAGATTTGTCCTATGCTAATAATAGTAAATTGAATGGTAGCATCGTAAGCAATTACAACAAGTATTTCCAGAATTGCTCATACGATGAGGCATCACCAAGGAGATTGGAAATGATCAAAGTTTTCTCAAACAAGTTAGAGCTAGATATCAAACAGTTGCTGAGTCCAAGAAGGCAGTGTTGTGATGTATTGAACTCTAGCGCTAGCAACATAATTGAAATTGGAATTAGAGAATGTAAAGATGATGAATTGATTTACATGCACTGA	1500	0.4207	MQNNNIKMQQHLMMIQKSTNKSKSQSLRNLILLLSTSFCVTYYILVSTQLLDTPKQILQHLNNNYSSKLSSSLQEHYPSTTIDHVVFGIASSGDSWPKRKQYTKLWWNNKTMKGCVFVDKTPIENGNDSSSLPPLCVSEDTSRFKYSYRGGLRSAIRVARVLKETVALNHSGVRWYVFGDDDTVFLPENLVKTLSKYDDRLWYYIGSNSESYKQKWFFGFDMAYGGAGFAISGSLAKVLAKVFDECIQRYPHVYGSDGRVYSCVTELGLALTLEPGFHQVDLRRNAFGLLASHPLTPLVSLHHPDYIDPIFPNINTTRAKSLEHLFQAVNVDSQRILQQTVCYHKRFSWTISVSWGYAVQVYQHPMLLTDVLRVQGTFKHWSGGDVLSPLYTFNTRGFHPHPCKRPTIFYLQDLSYANNSKLNGSIVSNYNKYFQNCSYDEASPRRLEMIKVFSNKLELDIKQLLSPRRQCCDVLNSSASNIIEIGIRECKDDELIYMH*	500

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy8g1541	499	Gene3D	-	72	349	-	-
	Ahy8g1541	499	PANTHER	TRANSFERRING GLYCOSYL GROUP TRANSFERASE	23	497	-	-
	Ahy8g1541	499	PANTHER	FRINGE-RELATED	23	497	-	-
	Ahy8g1541	499	Pfam	Protein of unknown function, DUF604	214	472	IPR006740	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy8g1541	Ahy-Chr8	32204651	32208397	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy8g1541	39	465	Glycosyltransferase	AT1G05280	51.843	5.52e-157	452

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy8g1541	-		-	gmx:100779943	622.854

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy18g0760	18	8363825	8368147	Ahy8g1541	8	32204651	32208397	hybridization
	Ahy13g1438	13	18428261	18430917	Ahy8g1541	8	32204651	32208397	PCT