Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1540 ATGAAGAAGCCACCAATTCAAAACCTCACCAGACTCCACCCTATGATCAAATTCATCTTAGCCACCATCTCAACATTTTGTGCCATCACCCTCTGTGTTTCAGTGCTACTCTTGGCCACAACAAAGATAGTCAACGTTGACCATTCATCACATCATGTTTCTGACCCTACAACACTCAATCACCTTGTGTTTGGAATCGCCTCTAGTGGAAAATCATGGCCTAGAAGAAAAGATTACGCAAAGCTATGGTGGAATCACAACAATGGAATGAGAGGGTGTGTTTTTGTCGATACTCTTCCGAGCAATGATACTAATAATTCTTCTTCTCCTCTTCTTCCTCCTCTCTGTGTCTCCGAGGACACTTCGAAATTTCGCTACACTTACCGGCGGGGAGGCCTCCGATCCGCGATCCGTGTGGCGCGTGTTGTTAAAGAGATTGTAGCATTGAACCATTCTGATGTGAGGTGGTATGTGTTTGGTGACGACGACACGGTGTTCTTGCCGGAGAATCTTGTGAAGATTCTGTCAAAGTATGATCATAGGCTTTGGTATTATGTTGGTGCACACACTGAGATGTATGAAGGGTGCCAGGTTTTTGGTTTTGGAATGGCCTTTGGTGGTGGCGGTTTTGCTATAAGTGCTCCTCTGGCGAAAGTGCTAGCCAAGGTTTTTGATTCTTGTATAGAAAGGTATACTCATCTATATGGAAGTGATGCAAGGGTCTACTCTTGCATAACAGAACTTGGAGTTGGCTTGACACATGAACCTGGTTTTCATCAGGTTGATCTAAGGGGAAACATCTTTGGCCTATTGGCTGCTCATCCAATGACTCCTTTGTTGTCCCTACACCATCCAGAAGCCATAGATTCAATATTTCCCAACATGACAGCAAAAGGAGCTCTTCAACACTTATTTGAAGCTGTAAAGGTCGATTCCCACAGGGTGCTACAACAAACTGTTTGCTATGACAATGAATCTTCATGGACAGTTTCAGTGTCATGGGGATATGCTGTCCAAGTTTTCCATAACAACATGCCCTTGCCAGAGGCAGTGAGAATCCAAAAGACTTTCAAGCAGTGGAAGGAAGGAGGGAGTGTTGTTGGAGGAATATACACTTTCAACACAAGAGAGGTTCACCCTGATCCATGTACAAGACCCTCGGTTTTCTACCTAGATAAGGTTTCTTATGGTAAAGATTTCTTCATCATAAGCAATTACAAGAAATCTTTTCAAAATTGCTCACATGACATGCCAACTAAGAAACTTGAAGTGATCAAAGTGGTCACAAATAAGCTAGACCTTGACATCAAACAGTTGCAGAGTCCTAGGAGGCACTGTTGTGATGTATTGCGCTCCACAACAGGTGACATGATGGAAGTTGCAATCAGAGAGTGTAAAGATGAAGAATTGATTTACATGCACTGA 1425 0.4323 MKKPPIQNLTRLHPMIKFILATISTFCAITLCVSVLLLATTKIVNVDHSSHHVSDPTTLNHLVFGIASSGKSWPRRKDYAKLWWNHNNGMRGCVFVDTLPSNDTNNSSSPLLPPLCVSEDTSKFRYTYRRGGLRSAIRVARVVKEIVALNHSDVRWYVFGDDDTVFLPENLVKILSKYDHRLWYYVGAHTEMYEGCQVFGFGMAFGGGGFAISAPLAKVLAKVFDSCIERYTHLYGSDARVYSCITELGVGLTHEPGFHQVDLRGNIFGLLAAHPMTPLLSLHHPEAIDSIFPNMTAKGALQHLFEAVKVDSHRVLQQTVCYDNESSWTVSVSWGYAVQVFHNNMPLPEAVRIQKTFKQWKEGGSVVGGIYTFNTREVHPDPCTRPSVFYLDKVSYGKDFFIISNYKKSFQNCSHDMPTKKLEVIKVVTNKLDLDIKQLQSPRRHCCDVLRSTTGDMMEVAIRECKDEELIYMH* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1540 474 PANTHER FRINGE-RELATED 13 472 - -
Ahy8g1540 474 Gene3D - 50 284 - -
Ahy8g1540 474 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 13 472 - -
Ahy8g1540 474 Pfam Protein of unknown function, DUF604 198 447 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1540 Ahy-Chr8 32198970 32201231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1540 56 439 Glycosyltransferase AT1G05280 53.846 2.20e-151 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1540 - - adu:107461911 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0759 18 8357782 8360056 Ahy8g1540 8 32198970 32201231 hybridization
Ahy8g1540 8 32198970 32201231 Ahy13g1438 13 18428261 18430917 PCT
Ahy13g1437 13 18420930 18424859 Ahy8g1540 8 32198970 32201231 PCT