Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0983 ATGGGTTGCTTCCTTGCTTGTTTTGGTTCCTCCAAATCCAAACGCAGAAAACACACGCACAGTGTTCAACGAAATGCTACAAGCAAGCCTGAGCAACCTAGAGTCTCTCTGGTTCAGGATCATTCCGAAACCTCTCTTAACACTGAATCAGAACTTCAGGGTAAAAATGAGGAGCAACTAAGTGTTAGTTCAAGAAAGAAAGTAACTTTTGATTCCAATATTAGAACCTATGATCCTGTTTCTCCTGATGAAGTTAGTGATTTCAAGAGTGGTGAAGAAGAGCATGCTGGAAAGGAGGAAGCATTGGAGAAACCAAGCCAATCGAAGCTCTCTTCCTCTGGAGACTGTTCAGTTACCTCAAAAGGGTCTTTCCCTCCAAATCACAGGTACCAGAATTGTAGGGAAAGTGATGATGAAGACGAAGAAGAATTGGATTATGGAGTTAGTGATCTCAGTGATGAAGATGAAGAATGTGATGAAATGGTTGAAGAGTTTGAAGAAGATAGGGTGAAAATCGATGTTGATCATGTGGTTACTGAAGGGGTTATGGAGAGTACAATCCAAAATTGTGAAAGTGATTTGAAGCCATTTGGGGTTAATCCCAATGCTAGAGATAGAAATGCTTATGTTCATCCTGTGTTAAACCCTGTCGAGAATCTCACTCAGTGGAAATCAGTCAAGGCCAAGAGAACAGTATCATCACCATTGAAGCCTCAGAAAGAGAATTATGTTTCTCCCAATCATGAATCTCCAAGGATTGCTATTGCAGCTGCGGAACAAAGTGTTAAGGAAGTTTCTTTCCACTTGAATTCGAAAACTGACTCACCAAAGAAGCTGAGCCAGGAAATTTCAGTTGATGAAAGTGTTAAGGAAGTTTCTTTCCAGTTGAATCCGAAAACTGACTCACCAAAGAAGCTGAGCCAGGAAATTTCAGTTGATGCTAGCCTCTCAAATTGGTTGGCTACTTCGTCAGAAACGAGCACACCTATGAACAAGGGTAGCTCAGTGTCCTTGAATTCAGTTACAACTCCTGAAAGAAGCACAGTCTCACAAGGTTCAAATTCTGTAATTAGCCATGATGATAGGCCTATTTTAGGTGCATTGACGTTGGAAGAAATCAAGCAATTTTCAGCTACTTCGTCACCAAGGAAGTCACCTAGTAGGAGTCCTGATGAGATGCCTATCATAGGCACTGTTGGGACCTACTGGAATTTTGCCGAAGAAGCCAGCACAGCATCATCCTTCAAAGGGATTCCCAACACAACAAGCAAGTATAGAGAGGATAAGAAAGTGAATTGGCACTCAACTCCATTTGAGACAAGGTTAGAGAAAGCTTTGAACAGAGGTGCTGCTGCTGGTGAAGCGTAG 1368 0.4196 MGCFLACFGSSKSKRRKHTHSVQRNATSKPEQPRVSLVQDHSETSLNTESELQGKNEEQLSVSSRKKVTFDSNIRTYDPVSPDEVSDFKSGEEEHAGKEEALEKPSQSKLSSSGDCSVTSKGSFPPNHRYQNCRESDDEDEEELDYGVSDLSDEDEECDEMVEEFEEDRVKIDVDHVVTEGVMESTIQNCESDLKPFGVNPNARDRNAYVHPVLNPVENLTQWKSVKAKRTVSSPLKPQKENYVSPNHESPRIAIAAAEQSVKEVSFHLNSKTDSPKKLSQEISVDESVKEVSFQLNPKTDSPKKLSQEISVDASLSNWLATSSETSTPMNKGSSVSLNSVTTPERSTVSQGSNSVISHDDRPILGALTLEEIKQFSATSSPRKSPSRSPDEMPIIGTVGTYWNFAEEASTASSFKGIPNTTSKYREDKKVNWHSTPFETRLEKALNRGAAAGEA* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0983 455 PANTHER RRNA BIOGENESIS PROTEIN RRP36 291 450 - -
Ahy12g0983 455 MobiDBLite consensus disorder prediction 322 358 - -
Ahy12g0983 455 MobiDBLite consensus disorder prediction 11 157 - -
Ahy12g0983 455 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 288 IPR039300 GO:0007142
Ahy12g0983 455 MobiDBLite consensus disorder prediction 136 157 - -
Ahy12g0983 455 MobiDBLite consensus disorder prediction 25 76 - -
Ahy12g0983 455 MobiDBLite consensus disorder prediction 265 308 - -
Ahy12g0983 455 MobiDBLite consensus disorder prediction 322 360 - -
Ahy12g0983 455 MobiDBLite consensus disorder prediction 85 105 - -
Ahy12g0983 455 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 291 450 IPR039300 GO:0007142
Ahy12g0983 455 MobiDBLite consensus disorder prediction 228 249 - -
Ahy12g0983 455 MobiDBLite consensus disorder prediction 286 308 - -
Ahy12g0983 455 PANTHER RRNA BIOGENESIS PROTEIN RRP36 1 288 - -
Ahy12g0983 455 MobiDBLite consensus disorder prediction 376 395 - -
Ahy12g0983 455 MobiDBLite consensus disorder prediction 106 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0983 Ahy-Chr12 20873849 20876287 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0983 - - ahf:112784009 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0983 12 20873849 20876287 Ahy2g0904 2 18093311 18095670 hybridization
Ahy16g1397 16 28032256 28034193 Ahy12g0983 12 20873849 20876287 PCT
Ahy6g0068 6 1015519 1017286 Ahy12g0983 12 20873849 20876287 PCT
Ahy16g1109 16 20061501 20063493 Ahy12g0983 12 20873849 20876287 PCT
Ahy6g0284 6 3550729 3552466 Ahy12g0983 12 20873849 20876287 PCT
Ahy12g0983 12 20873849 20876287 Ahy16g1397 16 28032256 28034193 PCT
Ahy12g0983 12 20873849 20876287 Ahy6g0068 6 1015519 1017286 PCT