Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1109 ATGATGAGGTGCTTTCTACCTACTTGTTTTGGTTCTTGCAAACGCTCTAAACGCTCCAATCCAACTGCTACACAGTCCCTTCATTCCAAAATCGAATTGCAATATGAATTATTGAATCGAAGTGCTGAAGCAGCTCATGCGGCCACACCTACCAAGGATGAAGAAGAGAGACTTGGAAGAAGAGGTGAGAAAAAAGATGAACACCAAGGAGAAGGAGAACAAGAGTTTTCGGAGTCGCTGTTTTCTCTCTCCATTGGCTCCACTAAACAGATTTCTGCTGCTCAAAATGCCGACACTACTGAAGTTAACAGTCCAATGCAGCAGCAGCAACAACTTCTTCTTGGAGTTGGAGAGGAGGATTCTGAAGCATTAGGATCAAGCGCACCAACTGTTCGGGAAAAGGTTCAAGGGAACTCGTCCAAGCCGGCTGGATTCTCTTCATCCGACAAGGAAGCAGACATAGCAAAACCTGCTGAGCAACAAAATTGCATTGCCAAAGAGAAGGTGAATCCTGAAGAAATAAATTCTTCTGCCAGAGAAGAAGGTGGTGATGTCAATGGAATTCAAGAAGAGTCTTCAGAGTCGTTGTTTTCGCTGTCGACTGATTATAGGAAACCAATTTCATCGGCTGAAATAGCGGAGACCGAAGTTAATAGCCTGAGGCAGGACAAGAAAGAAGAAACTCAAGAAAGGGTTCATGATATTTCCTCTGTGTTGAATCCAATTGAGAATGTTGATACACAAGGGAGGGTGGCCAAATCCACATTGCTTAAGTCACTGAAGAACAATGATAAAGAAAACATCAACAATTCAGCAGTGGAGGACATAGCAATATCCCTCAGTCCAGAGCCAAATATGAAGCTCTCAAAACGCAAGGCAAGGCAGAAGGCGAATGATAACAAGCTAGAGATTGGCGTTGACACCAGCCTATCCAGCTGGTTGGTTGAACCGGAAGGCACGCCTGTTTCGGTGAACAACAGTTCAGTGGGAGAACAGACACCAAAGGGAGGTAGAGGATCCTCATGGAGTAATGAGGATAGACCAATTCTAGGAGCATTGACAATTGAAGAGATCAGGATGCATTCCCTATCAAGATCTTCAAGAAGGACTAGAAGCAAGAGCCCCGACGAGACCCCCATCATAGGTACTGTCGGCAGCTACTGGACTCATACTGGTCAGGACATGGAGTCAAGCTTGAACAACAGTGGAAGAAAGGATGCAAAACTGAAATCAAGTACTTCAACATGTAAGACAAGACTAGAAAGAGCGTTCGAAGAAAGTGTTTGTGAAGTTTGA 1296 0.4452 MMRCFLPTCFGSCKRSKRSNPTATQSLHSKIELQYELLNRSAEAAHAATPTKDEEERLGRRGEKKDEHQGEGEQEFSESLFSLSIGSTKQISAAQNADTTEVNSPMQQQQQLLLGVGEEDSEALGSSAPTVREKVQGNSSKPAGFSSSDKEADIAKPAEQQNCIAKEKVNPEEINSSAREEGGDVNGIQEESSESLFSLSTDYRKPISSAEIAETEVNSLRQDKKEETQERVHDISSVLNPIENVDTQGRVAKSTLLKSLKNNDKENINNSAVEDIAISLSPEPNMKLSKRKARQKANDNKLEIGVDTSLSSWLVEPEGTPVSVNNSSVGEQTPKGGRGSSWSNEDRPILGALTIEEIRMHSLSRSSRRTRSKSPDETPIIGTVGSYWTHTGQDMESSLNNSGRKDAKLKSSTSTCKTRLERAFEESVCEV* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1109 431 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 138 426 IPR039300 GO:0007142
Ahy16g1109 431 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 52 110 IPR039300 GO:0007142
Ahy16g1109 431 Coils Coil 210 230 - -
Ahy16g1109 431 MobiDBLite consensus disorder prediction 317 347 - -
Ahy16g1109 431 PANTHER - 138 426 - -
Ahy16g1109 431 MobiDBLite consensus disorder prediction 317 340 - -
Ahy16g1109 431 MobiDBLite consensus disorder prediction 115 193 - -
Ahy16g1109 431 MobiDBLite consensus disorder prediction 41 81 - -
Ahy16g1109 431 PANTHER - 52 110 - -
Ahy16g1109 431 MobiDBLite consensus disorder prediction 362 412 - -
Ahy16g1109 431 MobiDBLite consensus disorder prediction 90 109 - -
Ahy16g1109 431 MobiDBLite consensus disorder prediction 131 146 - -
Ahy16g1109 431 MobiDBLite consensus disorder prediction 47 74 - -
Ahy16g1109 431 MobiDBLite consensus disorder prediction 376 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1109 Ahy-Chr16 20061501 20063493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1109 - - aip:107645787 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2179 19 131509258 131510976 Ahy16g1109 16 20061501 20063493 ECH
Ahy16g1109 16 20061501 20063493 Ahy16g1109 16 20061501 20063493 ECH
Ahy16g1109 16 20061501 20063493 Ahy6g0284 6 3550729 3552466 hybridization
Ahy16g1109 16 20061501 20063493 Ahy12g0983 12 20873849 20876287 PCT
Ahy16g1109 16 20061501 20063493 Ahy2g0904 2 18093311 18095670 PCT