Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1397 ATGGGTTGCTTCATTGGTTGTTTCGGTTCCACCAAGGATGCCAGACGCACAAGAAACAGACGCAAGCAAGGTGATTGTAGCAGCCGGGAGCAACAAATTGTATCTTTTCTTCAAGATCATTCCAAAAGCGGACTTAGTACTTCATCACAAGTCAAGGTTTTGGTTGGATTTAGGATTAAACCTGAGGAGCAGGTGAACTTGAATTTGAACCTGAATACCAGCACTAGAAAGAAAGTAACTTTTGATACCAATGTGAAAACCTATGAGCCTGTTTTGGTGGATGAGGTTGATGATTTCCAGCCAGAGAAGAAGAGTGAAGAAGAATGTGGAGAAGAAGAACATTTGGAAGCATCAAGCCAGAAAAGGTCTTGCTCTGAAGAAAATAGTTCGGTGACTTTGGCCGGGTCTTACTCAACAAACCATAGATACCAAAATTGCAGAGATAGTGATGAAGAAGAAGATGAAGAAATGGATTACTGGGATAGTGATCTTACTGATGATGATGATGAAGATGGTGATGGTGGCATGGGAGAAGAATATGATGAATTTGGAGAGGACTTTGAAGATGGACTAATATGCTCAAGGCCAAGAATTTCTGTGAATCAAGTGTTTGTCGAGGAAGTGGAGAATCCGATGCTAAATTGTGATAGCGATTTGAAGTCAATTGGCTTGAATCCGAATGCTCGGGATAGAAGTGGTTATGTTCATCCTGTGCTGAACCCGGTTGAAAACCTGAGTCAGTGGAAAGCAGTTAAGGCCAAAAGAACACCACCATTAAGGTCTCAGAAAGAGAATTGTGTTTCAAGTGAAGAGTCTTGGGTTGGATTGAATGCAGAACCAAGTTTCAGGGATAAATCTAAAACTGATCCATCAAAGAAGTTGTTGAGCCAGGAAATTGCAGTTGATGCCAGCCTTTCTAATTGGTTGGATTCATCAGAAGCTACGCCTGTTAAGAAGGCTAGCTCGGTTGGTCTGTATGTGGATACTCCCGCGAGCTCACAAGGCTCGAATTCAGTGATAAGCCATGAAGACAGGCCAATTTTAGGTGCATTGACAGCTGAAGAGCTCAAACAGTTTTCAGTTTCTTGTTTGCCAAGGAAGTTGGCAAGTCGAAGCCCAGATGAGGAGGCTATTATAGGCACTGTAGGGACTTACTGGAATGTTATGGGGACTTCTGAGGATACTGGCTCTGCAACTTCCTTTAAAGGAATAGCACAGAGAGCATGTAGAAGAGAGGGGTACAGGTGA 1248 0.4287 MGCFIGCFGSTKDARRTRNRRKQGDCSSREQQIVSFLQDHSKSGLSTSSQVKVLVGFRIKPEEQVNLNLNLNTSTRKKVTFDTNVKTYEPVLVDEVDDFQPEKKSEEECGEEEHLEASSQKRSCSEENSSVTLAGSYSTNHRYQNCRDSDEEEDEEMDYWDSDLTDDDDEDGDGGMGEEYDEFGEDFEDGLICSRPRISVNQVFVEEVENPMLNCDSDLKSIGLNPNARDRSGYVHPVLNPVENLSQWKAVKAKRTPPLRSQKENCVSSEESWVGLNAEPSFRDKSKTDPSKKLLSQEIAVDASLSNWLDSSEATPVKKASSVGLYVDTPASSQGSNSVISHEDRPILGALTAEELKQFSVSCLPRKLASRSPDEEAIIGTVGTYWNVMGTSEDTGSATSFKGIAQRACRREGYR* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1397 415 MobiDBLite consensus disorder prediction 97 127 - -
Ahy16g1397 415 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 405 IPR039300 GO:0007142
Ahy16g1397 415 PANTHER RRNA BIOGENESIS PROTEIN RRP36 1 405 - -
Ahy16g1397 415 MobiDBLite consensus disorder prediction 141 181 - -
Ahy16g1397 415 MobiDBLite consensus disorder prediction 149 181 - -
Ahy16g1397 415 MobiDBLite consensus disorder prediction 97 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1397 Ahy-Chr16 28032256 28034193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1397 - - ahf:112784009 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1397 16 28032256 28034193 Ahy6g0068 6 1015519 1017286 hybridization
Ahy16g1397 16 28032256 28034193 Ahy12g0983 12 20873849 20876287 PCT
Ahy16g1397 16 28032256 28034193 Ahy2g0904 2 18093311 18095670 PCT
Ahy12g0983 12 20873849 20876287 Ahy16g1397 16 28032256 28034193 PCT
Ahy2g0904 2 18093311 18095670 Ahy16g1397 16 28032256 28034193 PCT