Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0803 ATGAAAATTCAGCCAGTCAATTCTCCGGTACCGGTGGAGGGAGACACTAGTATTAACTTTGTTGCGAAGCCGATAGTTAAGTCGAGGTTCAAGCGCCTCTTCGAGAGGAATTTCGCTGGCGTTCTTAGAAATTCAGCCGCGGAGAAGATCGGCGGTGGACGATGTGGCGGTGGCGGTGAGGAAGTGCAATCGTCCGGTAGGGACGGTTTCAACGGCTCCAACGATTTTGAACCGAGCTCGGCGTGTCTGGCGAAAATGGTGCAGAGTTTCATCGAAGGTAATAATCTCGAGAAGCACTCCTCCGCTTCCGGTAGGTGCGGGCGTAACCGCTCTAACTGCTTCAACAGCATCTGCGACGATAGCTCCGACGACGAATCAGATGACTCCAACTGTTCTCCAGGCGAAGTCTCCGAAATCCTCAAGGGTTTGTCCACTTCGGCGAGCGTTAGCGAGAGAAACCTGCTGGCTGAAACGGCGAAGATCGTGGAGAAGAACAAGATCTGCAAAAGCAAAGACGGTTCGTGCAGAAAGATCGTCACTGAAGATTTGATCAATCTCGGATACGATGCCTCCATTTGCAAATCTCGCTGGGAGAAATTCTCATCTTACCCCGCTGGGGAGTACGAATATATAGATGTGATGATTGGGAAAGAGCGGTTGATAGTTGACGTTGATTTTAGGTCGGAATTCGAGATCGCTCGATCAACAAAAGCTTACAAGGCGATTCTCCAGAACCTTCCGTACATATTCGTCGGAAAGTGCGAGCGGCTCCAGAGGATCGTGGCGGTGGTTTCGGAGGCGGCGAAGCAGAGTCTGAAGAAGAAGGGGATGCACCTTCCACCGTGGCGGAGGGTAGAATACGTGAGAGCCAAGTGGCTCTCCCCTTACACTCGAATCACTGGTTCCGTTTCCAAAGAGGAGGGAAATTCTGCTCTGGATTCTGGTGCTGAGGGTGAAGAAAAGGAGGAGGAGGAGGAGGAGGAGGTGGTTGAGATTCAGTTGAAGCCGCCACCGCTGGAGATGAAGACCAAGGGTTCAACCTCACTTTCTGGTTTAGCAGCGGTTTTTCATGATGATGATGATAAGACATGA 1092 0.5128 MKIQPVNSPVPVEGDTSINFVAKPIVKSRFKRLFERNFAGVLRNSAAEKIGGGRCGGGGEEVQSSGRDGFNGSNDFEPSSACLAKMVQSFIEGNNLEKHSSASGRCGRNRSNCFNSICDDSSDDESDDSNCSPGEVSEILKGLSTSASVSERNLLAETAKIVEKNKICKSKDGSCRKIVTEDLINLGYDASICKSRWEKFSSYPAGEYEYIDVMIGKERLIVDVDFRSEFEIARSTKAYKAILQNLPYIFVGKCERLQRIVAVVSEAAKQSLKKKGMHLPPWRRVEYVRAKWLSPYTRITGSVSKEEGNSALDSGAEGEEKEEEEEEEVVEIQLKPPPLEMKTKGSTSLSGLAAVFHDDDDKT* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0803 363 MobiDBLite consensus disorder prediction 304 363 - -
Ahy12g0803 363 PANTHER OS03G0796600 PROTEIN 24 356 IPR006502 -
Ahy12g0803 363 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 176 299 IPR006502 -
Ahy12g0803 363 Pfam PDDEXK-like family of unknown function 85 298 IPR006502 -
Ahy12g0803 363 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 24 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0803 Ahy-Chr12 14495509 14497618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0803 - - adu:107473472 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0803 12 14495509 14497618 Ahy2g0674 2 11058878 11061313 hybridization
Ahy16g0169 16 1785472 1787765 Ahy12g0803 12 14495509 14497618 PCT
Ahy6g1156 6 16881268 16883605 Ahy12g0803 12 14495509 14497618 PCT
Ahy12g0803 12 14495509 14497618 Ahy16g0169 16 1785472 1787765 PCT
Ahy12g0803 12 14495509 14497618 Ahy6g1156 6 16881268 16883605 PCT