Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0791 ATGAATCCGGAGGAGTCAGTCATGGGAGGGAAGAGTTCAAGAGAGTGTGTTGGTGGTGATCGGAGACATGTTTCTTCATCATATGGTGGTGGTGGTGGTTCTTCATCTTCATGGGATAACTATGGAGGGTACCCTAATCAGAGTCCATATCAAACACCTCAACACCACCATGCATCAGCTCCATATTATGACTATGCTTCTTCACAACCAAAGAGAAAGCTTGATAGGAGATATTCAAGGATTAATGATGATTACCGTTCACATGATGAGGTTACTGCTGCTCTTGCAAATGCTGGCCTGGAATCTTCTAATCTCATTGTTGGCATTGATTTCACAAAGAGCAATGAGTGGACAGGGAAGCGGTCATTCAATCGAAAATGTTTGCATCACATTGGAAATGGTTATAATCCCTATGAACAAGCTATCTCGATTATCGGGAAAACTTTATCCGTTTTCGACGAAGATAACTTGATTCCTTGTTATGGATTTGGAGATGCATCGACGCATGATCAAGATGTATTTAGTTTCCATTCAGACGAGAGGTTCTGCAATGGATTTGAGGAAGTTTTGGCACGATACAGACAAATTGTTCCGCGCCTCAAACTTGCAGGTCCTACTTCATTTGCCCCAATTATCGAGATGGCGATAACTATTGTTGAGCAAAGTGGTGGCCAGTATCATGTCTTGCTGATAATTGCAGATGGACAGGTGACCAGAAGTATTGACACCAAGCATGGACACTTGAGTCCACAAGAACAGAAGACAATAGATGCCATTGTAAAAGCCAGCGAGTATCCACTCTCAATAGTTTTGGTCGGAGTTGGAGATGGACCTTGGGATATGATGAGGGAATTCGATGATAACATCCCTACTAGATCATTCGACAATTTTCAGTTTGTGAATTTTACCGAAATAATGTCGAGGAGTGCGGATCCGACCAAAAGAGAGGCAGACTTTGCTCTGGCAGCTTTGATGGAGATACCTTCTCAATATAAGGCAACCCTGGAACTTGGCATCTTAGGTTCAAGGAGGGGACATTCACCAGACAGGGTTCCTCTACCCCCACCTCTTTATGAAAGGAATCCATCTAGCCTTAGCACGAGATCTTATCGGCCGGACAGTTTTCAGCAGAATACGCCTATGCATACTGGCTATGATAATAGAGTTAACGCAGAACAATCTTCAAGTCCTCTATATGATAACAAGGTTTGTCCAATTTGTCTCACCAATGCAAAGGATATGGCTTTTGGTTGCGGGCATCAGACTTGTTGCGAATGCGGTGTAAACCTCGAATTCTGCCCCATTTGCCGGAGCACAATCCAAACCAGGATAAGGCTTTACTAG 1344 0.4353 MNPEESVMGGKSSRECVGGDRRHVSSSYGGGGGSSSSWDNYGGYPNQSPYQTPQHHHASAPYYDYASSQPKRKLDRRYSRINDDYRSHDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFNRKCLHHIGNGYNPYEQAISIIGKTLSVFDEDNLIPCYGFGDASTHDQDVFSFHSDERFCNGFEEVLARYRQIVPRLKLAGPTSFAPIIEMAITIVEQSGGQYHVLLIIADGQVTRSIDTKHGHLSPQEQKTIDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPTRSFDNFQFVNFTEIMSRSADPTKREADFALAALMEIPSQYKATLELGILGSRRGHSPDRVPLPPPLYERNPSSLSTRSYRPDSFQQNTPMHTGYDNRVNAEQSSSPLYDNKVCPICLTNAKDMAFGCGHQTCCECGVNLEFCPICRSTIQTRIRLY* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0791 447 PANTHER COPINE FAMILY PROTEIN 1 34 447 - -
Ahy10g0791 447 MobiDBLite consensus disorder prediction 360 392 - -
Ahy10g0791 447 ProSiteProfiles Zinc finger RING-type profile. 404 437 IPR001841 -
Ahy10g0791 447 MobiDBLite consensus disorder prediction 1 73 - -
Ahy10g0791 447 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 382 447 IPR013083 -
Ahy10g0791 447 MobiDBLite consensus disorder prediction 28 55 - -
Ahy10g0791 447 CDD RING-HC_RGLG_plant 403 447 IPR045317 GO:0061630|GO:0070534
Ahy10g0791 447 Pfam Zinc finger, C3HC4 type (RING finger) 401 442 - -
Ahy10g0791 447 PANTHER RING-FINGER PROTEIN 34 447 - -
Ahy10g0791 447 SUPERFAMILY vWA-like 103 287 IPR036465 -
Ahy10g0791 447 SUPERFAMILY RING/U-box 393 443 - -
Ahy10g0791 447 SMART VWA_4 102 305 IPR002035 -
Ahy10g0791 447 MobiDBLite consensus disorder prediction 344 392 - -
Ahy10g0791 447 Pfam Copine 127 340 IPR010734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0791 Ahy-Chr10 10250106 10255159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0791 K16280 - gmx:100798816 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1087 20 17178579 17183581 Ahy10g0791 10 10250106 10255159 hybridization
Ahy13g4063 13 140069966 140074028 Ahy10g0791 10 10250106 10255159 PCT
Ahy3g3785 3 137251530 137255806 Ahy10g0791 10 10250106 10255159 PCT