LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev10g1946	ATGGCATCATCAGCAAGATTCCTCCTCAAACTGTCCCTGTCCCTTATGTTCACCCTCTTGTTCATCTCACCCTCATTCTCATCTCCAACAACTACTTATCCAACAATCAATGATCTTCGATTCTCTGCATTGGCCTCTCTCCCAAAACTGCATGCAGAGAAGCTCATAAGAGGCCTCAACCTGTTCCCAAAAGATTCCATCAACACAATACACACTACTACTACTGACACCGACCCTCATCATCGAGGAAAGATCGTTGAGAAGTCCTTCACTTTCCCTAACCTTGCACCTTCCGCTTCCTCTGGCCCCTCTGTTCAAGACCTTGGTCATCATGCAGGATACTATCGCCTTCCTCGTTCCAAAGCTGCAAGGATGTTCTACTTTTTCTTTGAATCTCGCAGTAGTAGGGATGATCCAGTTGTCATATGGTTGACTGGAGGACCAGGGTGCAGCAGTGAACTAGCTTTATTTTATGAGAATGGTCCTTTTCAATTCACAAAGAACTTGTCTCTTGCATGGAATGATTATGGCTGGGATAAGGCATCAAATATTCTGTTTGTAGACCAACCCACTGGGACAGGTTTTAGCTACACTTCTGATGATAGTGACATTCGCCATGATGAAGCAGGTGTTAGCAATGATTTGTATGACTTCTTGCAGGCATTTTTCAAGGAGCACCCTCAGTTTGTTAAGAATGACTTCTACATTACTGGAGAGTCATATGCTGGACACTACATTCCAGCTCTTGCATCAAGGGTTCACCAAGGAAACAAAGCAAAAGAAGGAATTCATATAAACCTCAAGGGTTTTGCTATTGGAAATGGGTTAACCAATCCAGAAATTCAGTACCAGGCATACACAGATTATGCATTAGACAGGGGACTAATTAAAAAGGCTGATTATGACAGTATCAACAAGTTGATCCCACCGTGTGAGAAAGCCATTAAAGCTTGCGGCACTGAAGGTGGAGAAGCATGTATGTCTTCATTATATGTTTGCAATGACATATTCAATCGGATACTGTCCATTGCTGGAAACATTAATTACTATGACATTAGGAAGAAATGTGAGGGAAATCTGTGCTATGACTTCTCCAGTGTTGAGACATTCCTAAACATGAAGACAGTGAGGAATGCTTTAGGAGTTGGGGACTTGGACTTTGTCTCATGCAGTAGCACAGTGTATGATGCTATGATGCAGGACTGGATGAGAAATCTAGAAGTGGGAATTCCAGCCCTTCTTGAGGATGGAATCAAGGTGCTTGTGTATGCTGGAGAAGAAGATCTCATATGTAATTGGCTTGGGAATTCAAGGTGGGTTCATGCAATGGAGTGGCCAGGACAAAAAGAGTTTGGAGCATCTCCTTCGGTCCCATTTTTGGTGGAAGGCGCAGAAGCAGGAACGCTGAAAAGCCATGGACCTCTCGCATTCCTTAAGGTGAATGGAGCAGGGCATATGGTCCCTATGGACCAACCAAAAGCTGCACTTCAGATGCTAAGAAGCTGGATGCAAGGGAAATTGACCATGACAAAGAGTGGATCTCATGTCTCTCCTGAGTGA	1560	0.4385	MASSARFLLKLSLSLMFTLLFISPSFSSPTTTYPTINDLRFSALASLPKLHAEKLIRGLNLFPKDSINTIHTTTTDTDPHHRGKIVEKSFTFPNLAPSASSGPSVQDLGHHAGYYRLPRSKAARMFYFFFESRSSRDDPVVIWLTGGPGCSSELALFYENGPFQFTKNLSLAWNDYGWDKASNILFVDQPTGTGFSYTSDDSDIRHDEAGVSNDLYDFLQAFFKEHPQFVKNDFYITGESYAGHYIPALASRVHQGNKAKEGIHINLKGFAIGNGLTNPEIQYQAYTDYALDRGLIKKADYDSINKLIPPCEKAIKACGTEGGEACMSSLYVCNDIFNRILSIAGNINYYDIRKKCEGNLCYDFSSVETFLNMKTVRNALGVGDLDFVSCSSTVYDAMMQDWMRNLEVGIPALLEDGIKVLVYAGEEDLICNWLGNSRWVHAMEWPGQKEFGASPSVPFLVEGAEAGTLKSHGPLAFLKVNGAGHMVPMDQPKAALQMLRSWMQGKLTMTKSGSHVSPE*	520

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev10g1946	519	Gene3D	alpha/beta hydrolase	95	516	IPR029058	-
	Aev10g1946	519	Pfam	Serine carboxypeptidase	107	505	IPR001563	GO:0004185\|GO:0006508
	Aev10g1946	519	ProSitePatterns	Serine carboxypeptidases, histidine active site.	475	492	IPR033124	GO:0004185
	Aev10g1946	519	PRINTS	Carboxypeptidase C serine protease (S10) family signature	187	197	IPR001563	GO:0004185\|GO:0006508
	Aev10g1946	519	PRINTS	Carboxypeptidase C serine protease (S10) family signature	222	247	IPR001563	GO:0004185\|GO:0006508
	Aev10g1946	519	PRINTS	Carboxypeptidase C serine protease (S10) family signature	174	186	IPR001563	GO:0004185\|GO:0006508
	Aev10g1946	519	PRINTS	Carboxypeptidase C serine protease (S10) family signature	475	488	IPR001563	GO:0004185\|GO:0006508
	Aev10g1946	519	SUPERFAMILY	alpha/beta-Hydrolases	108	506	IPR029058	-
	Aev10g1946	519	ProSitePatterns	Serine carboxypeptidases, serine active site.	236	243	IPR018202	GO:0004185
	Aev10g1946	519	PANTHER	SERINE CARBOXYPEPTIDASE 3	39	508	-	-
	Aev10g1946	519	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	39	508	IPR001563	GO:0004185\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev10g1946	Aev-Chr10	20839798	20842789	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev10g1946	K16298		-	gmx:100785987	840.876

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev10g1946	10	20839798	20842789	Aev10g1946	10	20839798	20842789	ECH
	Aev10g1946	10	20839798	20842789	Aev04g2949	04	29274897	29280349	PCT
	Aev04g2948	04	29267448	29272917	Aev10g1946	10	20839798	20842789	PCT