Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2949 ATGGCATTGTCATCACCAACCCCAACCAAAATTTCTCTGACTCTCTTGTTTCTTGTTTTCTTCATCATTTCATCTTCTTTTTCATCGCACGCCGCAAGAACTTCTCCTTTTACCAATAGTAATAATGAGCTAATAATTGGATTGTCCCCAGCAGAAAGGCTCATAAGAAGCCTTAACTTGTTCCCAAATAAGGCAGTGAACATAAGAGAAAGTGGTGGTGATGATGATGGTGTCTTTGTCCCTGGAAAGATTGTAGAGAAGAAGTTCTCACTTTTGGGTGATTCTGTTGAAGAAAAGCTTGGTCACCATGCAGGCTATTTTTCACTTCGTACCAAAGCTTCAAGGATGTTCTACTTTTTCTTTGAATCTCGGAACAACACTAAAGATGACCCAGTTGTGATATGGTTGACTGGAGGACCAGGGTGTGGTAGTGAACTAGCCATGTTCTATGAGAATGGTCCATTTCATATTTCCAATAATTTGTCTCTTGTATCGAATCCCTATGGTTGGGACAAGGTTTCAAATATTCTATTTGTTGACCAACCAGTTGGGACAGGTTTCAGCGAAGCTTTCAATTATTCTGACATTCCCCATGATGAAGACAGCGTTAGTAATGATTTGTATGATTTCCTTCAGGCATTTTTCAAGGAGCACTCTGAGCTTGTCAAGAATGATTTTTATATTACTGGCGAATCATATGCCGGACACTATATTCCAGCTCTTGCATCCCGGATTCAACAAGGAAATCAAGAAAAACAAGGAACTCTTATAAATCTAAAGGGCATAGCCATTGGTAATGGTTTAACCAACCCTGGAATTCAATATCAAGCATACACAGACTTTGCATTATTCAGTAATTTAATTACACAAAAAGATTACAACAATATCAGCAAGTTGATCCCACCGTGTGAGCAAGCCATACAAACTTGCGCCACCGAAGGTGAAGATAGTTGTGTGAAGGCGAAGGCTACTTGCGATATCATATTCTCCACTATATTTTCCATCAATGGCAATGACTACATCAATTACTATGACATCAGAAAGAAATGCGATGGAGGACCATTGTGCTATGATTTCTCAAAGATGGAGAATTTATTAAGAGAGGAAAGAGTGAGGGAAGCTTTAGGTGTGGGGAACATGACGTTTGTTTCATGCAGCAGAACAGTGTATGATGCTATGAGACGTGATTGGATGAAGAACCTTGAATCTCCTATTCCTGCTCTTCTTGAACATGGAATCAGGTTGCTTGTCTATGCTGGCGAATTTGATTTCATATGCAACTGGATCGGGAATGAAAGGTGGGTGCATGCGATGCAATGGTCAGGTCAAAAGAAGTTTGAGGCAGCTCCTACTGTCCAATTTATTGTCAATGGTGAAGCAGAAGCAGGGGTGATCAAAACCTATGGACCTCTCTCTTTCCTCAAGGTATATGAGGCAGGGCACATGGTCCCTATGGATCAACCAAAAGCTGCACTTGAGATGCTTACAAGATGGATGCAAGGGAAACTGGTCCAGTAA 1518 0.4078 MALSSPTPTKISLTLLFLVFFIISSSFSSHAARTSPFTNSNNELIIGLSPAERLIRSLNLFPNKAVNIRESGGDDDGVFVPGKIVEKKFSLLGDSVEEKLGHHAGYFSLRTKASRMFYFFFESRNNTKDDPVVIWLTGGPGCGSELAMFYENGPFHISNNLSLVSNPYGWDKVSNILFVDQPVGTGFSEAFNYSDIPHDEDSVSNDLYDFLQAFFKEHSELVKNDFYITGESYAGHYIPALASRIQQGNQEKQGTLINLKGIAIGNGLTNPGIQYQAYTDFALFSNLITQKDYNNISKLIPPCEQAIQTCATEGEDSCVKAKATCDIIFSTIFSINGNDYINYYDIRKKCDGGPLCYDFSKMENLLREERVREALGVGNMTFVSCSRTVYDAMRRDWMKNLESPIPALLEHGIRLLVYAGEFDFICNWIGNERWVHAMQWSGQKKFEAAPTVQFIVNGEAEAGVIKTYGPLSFLKVYEAGHMVPMDQPKAALEMLTRWMQGKLVQ* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2949 505 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 43 501 - -
Aev04g2949 505 Pfam Serine carboxypeptidase 99 501 IPR001563 GO:0004185|GO:0006508
Aev04g2949 505 ProSitePatterns Serine carboxypeptidases, serine active site. 228 235 IPR018202 GO:0004185
Aev04g2949 505 Gene3D alpha/beta hydrolase 86 505 IPR029058 -
Aev04g2949 505 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 501 IPR001563 GO:0004185|GO:0006508
Aev04g2949 505 SUPERFAMILY alpha/beta-Hydrolases 100 502 IPR029058 -
Aev04g2949 505 PRINTS Carboxypeptidase C serine protease (S10) family signature 214 239 IPR001563 GO:0004185|GO:0006508
Aev04g2949 505 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 189 IPR001563 GO:0004185|GO:0006508
Aev04g2949 505 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 178 IPR001563 GO:0004185|GO:0006508
Aev04g2949 505 PRINTS Carboxypeptidase C serine protease (S10) family signature 471 484 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2949 Aev-Chr4 29274897 29280349 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2949 K16298 - gmx:100785987 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1946 10 20839798 20842789 Aev04g2949 04 29274897 29280349 PCT