Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2948 ATGGCATCCTCATCACCAGTTACCCTCTCTCTCTTCCTCTTGTTTTTGTTATTCATTTCATTATCTTCTTTGTCATACGCATCAAGAACCACTTCTAATTTTACTAAGAACAATGAACTTCTTCTTCATCGCTTGCCCCCAGGAGAAAGGCTCATAAGAAGCCTTAACTTGTTCCCAAAAAAGGCAGCTAACATAATAAAAGGCCAAGTTGGTGAAGAACCAATTAGTAGTTTTGTCCCACCTGGAACCATTGTGGAGAAGAAGTTCTCATTTCTTGCTGATTCTGGTCCTTCTATTAATGATCTTGGTCACCATGCTGGCTATTATTCACTTCCTCAAACCAAAGATGCAAGGATGTTCTACTTTTTCTTTGAATCTCGGAACAGTAAGGATGATCCTGTTGTAATATGGTTGACTGGAGGACCAGGATGTGGTAGTGAACTAGCATTGTTCTATGAGAATGGTCCATTTCATATTGCCAATAACTTGTCTCTTGTTTGGAATGATTATGGCTGGGATAAGGCATCAAATATTTTATTTGTTGATCAACCCATTGGGACTGGTTTCAGCTACGTTTCAAGTGATAATGACATTCCCCATGATGAACAAGGGGTTAGCAAAAATTTATATGACTTCTTGCAGGCTTTCTTTAAGGAACATTCTGATCTTGTCAAGAATGATTTTTACATTACTGGAGAATCATATGGTGGACACTATATTCCAGCTCTTGCATCTCGGATTCACCAAGGAAACAAAAAACAAGAAGGCATTCTTATAAATCTAAAGGGTTTTGCTATTGGTAACGGGTTAACCAATCCTGAAATTCAGTACCAATCATACACAGACTTTGCATTAGACAATAATTTGATTACAAAGAGTGATTATGATGATATCAATCATATGATTCCACAGTGTGTGCAAGGCATCAAATCTTGTGGCACTGAAAGTGAATCTAGCTGTAATACCGCTAAGAATGTTTGTGATAGGATATTCAAGAGTGTCATGAGAGACGCTGGGACTGATCTTAATTACTATGACATCCGAAAGAAATGTGAGGGATTATTGTGCTACGACTTCTCAAACATGGAGAATTTGTTGAACAAGAAAGAAGTGAAGGAAGCATTAGGTGTTGGGAAGATGGAGTTTGTTTCATGCAGTGATACAGTGTATTCCAATATGGCGGGGGATTGGATGAAGAACTTGGAATTGGGAATTCCTTCCCTTCTTGAGGATGGAATCAAGTTGCTTGTCTATGCTGGAGAATATGATCTCACTTGCAATTGGCTCGGGAATTCAAGATGGGTTAATGCCATGGAATGGTCAGGTCAAAAGGAATTTAAGGACTCTCCTATGGTACACTTTGAGGTTGATGGTGCTGAAGTAGGGACCCTTAAAAGCTATGGACCTCTCTCTTTCCTAAAGGTACATAAAGCAGGGCACTATGTCCCTATGGACCAACCAAAAGTTGCACTTGAGATGCTTACAAGATGGATGGAAAGTAATTTAGTTGGAACAACCAAAACAATAATTAATCTACCTAAAGATGATGTACGCATCATCTCAAAATAA 1569 0.3875 MASSSPVTLSLFLLFLLFISLSSLSYASRTTSNFTKNNELLLHRLPPGERLIRSLNLFPKKAANIIKGQVGEEPISSFVPPGTIVEKKFSFLADSGPSINDLGHHAGYYSLPQTKDARMFYFFFESRNSKDDPVVIWLTGGPGCGSELALFYENGPFHIANNLSLVWNDYGWDKASNILFVDQPIGTGFSYVSSDNDIPHDEQGVSKNLYDFLQAFFKEHSDLVKNDFYITGESYGGHYIPALASRIHQGNKKQEGILINLKGFAIGNGLTNPEIQYQSYTDFALDNNLITKSDYDDINHMIPQCVQGIKSCGTESESSCNTAKNVCDRIFKSVMRDAGTDLNYYDIRKKCEGLLCYDFSNMENLLNKKEVKEALGVGKMEFVSCSDTVYSNMAGDWMKNLELGIPSLLEDGIKLLVYAGEYDLTCNWLGNSRWVNAMEWSGQKEFKDSPMVHFEVDGAEVGTLKSYGPLSFLKVHKAGHYVPMDQPKVALEMLTRWMESNLVGTTKTIINLPKDDVRIISK* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2948 522 Pfam Serine carboxypeptidase 102 499 IPR001563 GO:0004185|GO:0006508
Aev04g2948 522 Gene3D alpha/beta hydrolase 84 510 IPR029058 -
Aev04g2948 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 191 IPR001563 GO:0004185|GO:0006508
Aev04g2948 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 470 483 IPR001563 GO:0004185|GO:0006508
Aev04g2948 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 180 IPR001563 GO:0004185|GO:0006508
Aev04g2948 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 216 241 IPR001563 GO:0004185|GO:0006508
Aev04g2948 522 ProSitePatterns Serine carboxypeptidases, serine active site. 230 237 IPR018202 GO:0004185
Aev04g2948 522 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 504 IPR001563 GO:0004185|GO:0006508
Aev04g2948 522 PANTHER SERINE CARBOXYPEPTIDASE 3 36 504 - -
Aev04g2948 522 SUPERFAMILY alpha/beta-Hydrolases 100 503 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2948 Aev-Chr4 29267448 29272917 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2948 K16298 - gmx:100798795 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2948 04 29267448 29272917 Aev04g2948 04 29267448 29272917 ECH
Aev04g2948 04 29267448 29272917 Aev10g1946 10 20839798 20842789 PCT