Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev03g3039 | ATGGCAAGTCATGGTCGAAGGAGTATGTCGGTAACAAATAGCCCTTCGCGCTCTAAGAAGAAAAACTCATCCCCCGATCTTAGGAAAACATTTAGCCATCAACGCACGGGAGAGCGAACCGTGAGATCATTGCGACTTTCAAAGGCCTTGACGGTGCCTGAAACAACTACTGTTTATGATGCTTGTCGTCGCATGGCTGCTCGTAAAGTTGATGCTCTTTTACTAACTGATTCTAATGCCTTGCTATGTGGAATTCTCACTGACAAGGATATAGCTACAAGAGTCATTGCTCCTGAGGTTAATCTTGAAGAGACTCCTGTTTCTAAGGTTATGACTAGAAATCCTGTATTTGTCCTTTCCGACACTCTTGCTGTGGAAGCTCTCCAAAAGATGGTGCAAGGCAAATTTAGACATTTACCTGTGGTAGAGAATGGAGAAGTTATTGCCATGCTTGACATTGCAAAGTGTTTGTATGATGCCATTGCCCGTTTGGAAAGGGCAGCTGAGAAAGGAAAGGCAATTGCAGCAGCCGTTGACGGTATCGAAAAGCACATCGGAGGATCTGCCTCTGGCACCAATTCATCATTCATTGAGACTCTTCGAGAGCAAATATTCAAGCCATCATTATCTACTATCATTCCTGAGAATTCAAAGGTTGTAACAGTTTCACAAACAGACACAATTTTGGAAGCAACAAAGAAGATACTTGAAGTTGGTGCTAGTTGTGCTATTGTGACGAGTGAAGACAAACCTCATGGTATCCTCACTTCAAAGGATATCTTGATGCGGGTAATAGCACAAAACCTTCCTCCATCATCAACTCTTGTTGAGAAGGCTATGACCCCAAATCCACAATGTGCAATGGTTGATACACCAATTGTTGATGCACTTCACACCATGCAAGATGGGAAATTTTTGCATCTTCCCGTGCTTGATAAAGATGGCTCTGTTGCTGCTATTGTTGATGTGATTACAATCACTCATGCTGCTGTGGCGACAGCTAGTCAGGTTGGAAATACTGCCACTTTGAACCATGAAGCTGCTAACTCCATGATACAGAAGTTTTGGGATTCGGCCATGGCTTTGCCTCCGGATGATGATGATGATACGCAAAGTGACAGTTCATTGAAGTTGATTTCTGAGGGAGGAGAAACAGGGAGATCCATTTGTTTCAATTCATCAAGTATGGCTAGTGCATTTTCCTTCAAAATACAAGACAAGAAGGGGAGATTGCATAGATTCACATGTGATACACGGAGCTTGACAGAGGTTATAACTTGTATCATTCAGAGAGTCGGTGATGATATTGACCCTAACAACCTGCCCCAAATTCTGTATGAAGACGAAGAGCATGATAATGTTGTGCTGGCTTCAGACAATGATCTTTCTGCAGCAGTGGACCACGCAAAGGCAACGGGTTTGAAGGGATTGAGACTGCATTTAGACTTCTCAGGAGTACATGGTCATGGAAGAGATGGTTCAGAAAGTGTGGAAAATAATACCACTTCAGCATGGGCCTCGGCGTACAGTGCCGTTGCAGCTGGAGCTGCAATCATTGCTGGCTTAGGCCTTTTAGCATTCTTGAGGCGAACTCGATGA | 1599 | 0.4378 | MASHGRRSMSVTNSPSRSKKKNSSPDLRKTFSHQRTGERTVRSLRLSKALTVPETTTVYDACRRMAARKVDALLLTDSNALLCGILTDKDIATRVIAPEVNLEETPVSKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAIARLERAAEKGKAIAAAVDGIEKHIGGSASGTNSSFIETLREQIFKPSLSTIIPENSKVVTVSQTDTILEATKKILEVGASCAIVTSEDKPHGILTSKDILMRVIAQNLPPSSTLVEKAMTPNPQCAMVDTPIVDALHTMQDGKFLHLPVLDKDGSVAAIVDVITITHAAVATASQVGNTATLNHEAANSMIQKFWDSAMALPPDDDDDTQSDSSLKLISEGGETGRSICFNSSSMASAFSFKIQDKKGRLHRFTCDTRSLTEVITCIIQRVGDDIDPNNLPQILYEDEEHDNVVLASDNDLSAAVDHAKATGLKGLRLHLDFSGVHGHGRDGSESVENNTTSAWASAYSAVAAGAAIIAGLGLLAFLRRTR* | 533 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev03g3039 | 532 | Pfam | PB1 domain | 400 | 482 | IPR000270 | GO:0005515 | |
| Aev03g3039 | 532 | Gene3D | - | 15 | 176 | IPR046342 | - | |
| Aev03g3039 | 532 | Gene3D | - | 190 | 342 | IPR046342 | - | |
| Aev03g3039 | 532 | PANTHER | CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED | 20 | 520 | IPR034896 | - | |
| Aev03g3039 | 532 | SUPERFAMILY | CBS-domain pair | 38 | 155 | IPR046342 | - | |
| Aev03g3039 | 532 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Aev03g3039 | 532 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 20 | 520 | - | - | |
| Aev03g3039 | 532 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
| Aev03g3039 | 532 | SUPERFAMILY | CBS-domain pair | 217 | 330 | IPR046342 | - | |
| Aev03g3039 | 532 | CDD | CBS_pair_MUG70_1 | 46 | 162 | - | - | |
| Aev03g3039 | 532 | ProSiteProfiles | PB1 domain profile. | 397 | 484 | IPR000270 | GO:0005515 | |
| Aev03g3039 | 532 | SUPERFAMILY | CAD & PB1 domains | 393 | 481 | - | - | |
| Aev03g3039 | 532 | CDD | CBS_pair_MUG70_2 | 216 | 332 | - | - | |
| Aev03g3039 | 532 | ProSiteProfiles | CBS domain profile. | 111 | 169 | IPR000644 | - | |
| Aev03g3039 | 532 | Pfam | CBS domain | 216 | 262 | IPR000644 | - | |
| Aev03g3039 | 532 | Pfam | CBS domain | 47 | 93 | IPR000644 | - | |
| Aev03g3039 | 532 | Pfam | CBS domain | 276 | 323 | IPR000644 | - | |
| Aev03g3039 | 532 | Pfam | CBS domain | 107 | 151 | IPR000644 | - | |
| Aev03g3039 | 532 | ProSiteProfiles | CBS domain profile. | 45 | 104 | IPR000644 | - | |
| Aev03g3039 | 532 | ProSiteProfiles | CBS domain profile. | 212 | 272 | IPR000644 | - | |
| Aev03g3039 | 532 | SMART | cbs_1 | 48 | 96 | IPR000644 | - | |
| Aev03g3039 | 532 | SMART | cbs_1 | 114 | 158 | IPR000644 | - | |
| Aev03g3039 | 532 | SMART | cbs_1 | 218 | 265 | IPR000644 | - | |
| Aev03g3039 | 532 | SMART | cbs_1 | 283 | 334 | IPR000644 | - | |
| Aev03g3039 | 532 | MobiDBLite | consensus disorder prediction | 21 | 42 | - | - | |
| Aev03g3039 | 532 | ProSiteProfiles | CBS domain profile. | 280 | 342 | IPR000644 | - | |
| Aev03g3039 | 532 | SMART | PB1_new | 399 | 484 | IPR000270 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev03g3039 | Aev-Chr3 | 29317699 | 29320845 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev03g3039 | - | - | gmx:100783514 | 732.635 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aev03g3039 | 03 | 29317699 | 29320845 | Aev08g2535 | 08 | 24091748 | 24096006 | PCT | |
| Aev08g2408 | 08 | 23083665 | 23088482 | Aev03g3039 | 03 | 29317699 | 29320845 | PCT |