Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2408 ATGGCAAGTCAAAGTGGTTCCTCTCGAAGGAGTATTTCATCAACGAGGAGAGCCTCTGAGTCTGGAGCTCCTCAATCTAATGTTCGAAAATCTTTTTCGTCTTCTCGTCCCATGGTTTTAACGGGAGAGCGGACTGTGAAATCATTGCGCCTTTCAAAGGCTCTTACAATACCTGAAACAACAACCATCTATGATGCCTGCCGTCGTATGGCTGCACGCAGAGTTGATGCTATATTACTAACAGATTCTAATGGTTTGCTCTGTGGAATCCTCACAGACAAGGACATAACAAAAAAAGTTATTGCCCATGAAGTTAGTCTTGAAGACACGCCTGTTTCCAAAGTTATGACTAGGAATCCAGTATTTGTCCTTTCTGAAACTCTTGCGGTGGAAGCCCTCCAAAAGATGGTGCAAGGGAAATTCAGGCATTTACCTGTGGTGGAGAATGGAGAAGTTGTTGCCTTACTTGACATAGCAAAGTGTTTGTATGATGCCATCGCTCGTATGGAAAGGGCAGCTGAGAAAGGAAAAGCAATTGCAGCAGCAGTTGAGGGTGTTGAAAAAAATTGGGGAACAACTGGTCCTGTCAATTCAACGTTCATCGAGACTCTGCGGGAGCAAATATTCAAGCCATCATTGTCTACAATCATTCATGAGAATTCAAAGGTTGTAACAGTTTCACCAACCGACTCTGTTCTGATAACTACAAAGAAGATGCTTGAACTTCATTCAAGTTCTGCTGTTGTGACAGTTGATGGCAAACCTCGTGGTATCCTTACTTCAAAGGATATCTTGATGCGGGTAATTGCACAAAATTTTCCTCCAGACTCAACTCCTGTTGAGAAGGTCATGACTCCAAGTCCAGAATGTGCAGTTATTGATACACCAATAGTTGATGCACTTCACACTATGCATGATGGAAAATTTTTGCATCTTCCTGTAGTTGATAGAGATGGCAGTGTAGTTTCTGTGGTTGATGTGATCAATGTCACTCATGCTGCTGTGGCAACAGTAAGTCAGGTTGGAAACAGTGAAGTTGCCAGCTCCATGATGCAAAGATTTTGGGATTCAGCCATGGCCTTAACTCCAAATGATGATGATGACGAAACACGAAGTGACAATTCCTTAAAATTGGCTTCTGATGGAGGAGAAGCAGGGAGATCCCTAACTTATCTTGCATCAAGCATGCCAAATACGTTTTCCTTCAAAATACAAGATAAGAAGGGCAGAATGCATAGATTCACATGCGTCCTTTCATGGTTTGCATTGCATTTCTCCTGTCAGTGGATGCTTGTATTTTGCTGTATTCATAAGCAGCTGTTATTCTTTTCATTTCTTCTCTATGAGCAAGTCAGTATGTTAAATTTTAGGTATGAAGATGAAGACCATGATAAAGTTGTATTGGCTTCAGATAGCGATCTTGCTGCAGCTGTGGACCATGCAAGGACAGCTGGTTTGAAGGGATTGAAATTGCATTTAGACTACACAGGAACACGAGGCGGTTCTCGGAAAGGTTCTAGTTCGACAAGTTTGGAGCATGCTCCTTCAGATGCATGGGCCTCAGCATATGGTGCCGTCGCTGCTGGAGCTGCATTTGTTGCTGGCTTAAGCATACTAACGTACTTGAAGCGAGTTTGA 1638 0.428 MASQSGSSRRSISSTRRASESGAPQSNVRKSFSSSRPMVLTGERTVKSLRLSKALTIPETTTIYDACRRMAARRVDAILLTDSNGLLCGILTDKDITKKVIAHEVSLEDTPVSKVMTRNPVFVLSETLAVEALQKMVQGKFRHLPVVENGEVVALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKNWGTTGPVNSTFIETLREQIFKPSLSTIIHENSKVVTVSPTDSVLITTKKMLELHSSSAVVTVDGKPRGILTSKDILMRVIAQNFPPDSTPVEKVMTPSPECAVIDTPIVDALHTMHDGKFLHLPVVDRDGSVVSVVDVINVTHAAVATVSQVGNSEVASSMMQRFWDSAMALTPNDDDDETRSDNSLKLASDGGEAGRSLTYLASSMPNTFSFKIQDKKGRMHRFTCVLSWFALHFSCQWMLVFCCIHKQLLFFSFLLYEQVSMLNFRYEDEDHDKVVLASDSDLAAAVDHARTAGLKGLKLHLDYTGTRGGSRKGSSSTSLEHAPSDAWASAYGAVAAGAAFVAGLSILTYLKRV* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2408 545 CDD CBS_pair_MUG70_1 51 167 - -
Aev08g2408 545 ProSiteProfiles CBS domain profile. 284 345 IPR000644 -
Aev08g2408 545 ProSiteProfiles CBS domain profile. 116 174 IPR000644 -
Aev08g2408 545 Pfam CBS domain 220 266 IPR000644 -
Aev08g2408 545 Pfam CBS domain 52 99 IPR000644 -
Aev08g2408 545 Pfam CBS domain 112 156 IPR000644 -
Aev08g2408 545 Pfam CBS domain 280 326 IPR000644 -
Aev08g2408 545 MobiDBLite consensus disorder prediction 1 37 - -
Aev08g2408 545 SUPERFAMILY CAD & PB1 domains 393 497 - -
Aev08g2408 545 Pfam PB1 domain 456 494 IPR000270 GO:0005515
Aev08g2408 545 Gene3D - 435 493 - -
Aev08g2408 545 ProSiteProfiles CBS domain profile. 50 107 IPR000644 -
Aev08g2408 545 ProSiteProfiles CBS domain profile. 219 277 IPR000644 -
Aev08g2408 545 SUPERFAMILY CBS-domain pair 221 334 IPR046342 -
Aev08g2408 545 SMART cbs_1 222 269 IPR000644 -
Aev08g2408 545 SMART cbs_1 53 101 IPR000644 -
Aev08g2408 545 SMART cbs_1 287 335 IPR000644 -
Aev08g2408 545 SMART cbs_1 119 163 IPR000644 -
Aev08g2408 545 SUPERFAMILY CBS-domain pair 43 160 IPR046342 -
Aev08g2408 545 MobiDBLite consensus disorder prediction 363 383 - -
Aev08g2408 545 Gene3D - 25 181 IPR046342 -
Aev08g2408 545 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 21 533 - -
Aev08g2408 545 Gene3D - 210 338 IPR046342 -
Aev08g2408 545 ProSiteProfiles PB1 domain profile. 397 496 IPR000270 GO:0005515
Aev08g2408 545 PANTHER CBS/OCTICOSAPEPTIDE/PHOX/BEMP1 (PB1) DOMAIN PROTEIN 21 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2408 Aev-Chr8 23083665 23088482 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2408 - - gmx:100785816 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2408 08 23083665 23088482 Aev03g3039 03 29317699 29320845 PCT