Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev08g2535 | ATGAGTGCTCAAGCTCCTCCTCCTTCTTCGGTGGCTTCCACCACCAGGAAGTCGAAGCGCTCCTCCTCCTCCGGTTCCCGCAAATCACTTTCCGATAATGGAACTAACAAGCCTCCCTCTCCTAATGCCCCTTCTCAACCGTCCGATGGAGGAGATAGGACGGTGAAGAAGCTGCGGTTGTCGAAGGCACTCACTATCCCCGATGGCACTACCGTCTCCGACGCCTGTCGACGAATGGCTGCTCGACGCGTGGACGCTGTTTTGCTCACGGATTCCAACGCTCTCCTCTCCGGAATTCTCACCGATAAGGACGTTGCTACTAGAGTTATCGCTGAGGGGTTGAGGACGGACCAGACGCCGGTTTCCAAAGTAATGACGCGCAATCCTATTTTCGTCACGTCGGATACGCTCGCCATTGAAGCTCTTCAGAAGATGGTTCAGGGCAAATTCAGGCACCTTCCTGTTGTGGAAAATGGTGAAGTCATTGCGATGCTGGATATCACCAAATGTCTTTATGATGCCATATCTAGGATGGAGAAAGCTGCTCAGCAGGGGAGTGCCATTGCAGCTGCAGTTGACGGGGTGGAACAGCGTAGCAATGCATCTGCACCAAATGCTTTCATTGAGACATTGAGGGAGCGCATGTTCAAGCCTTCCCTTTCAACTATAGTTGGAGAAAATACAAAGGTTGCTATTGTATCACCATCAGACACTGTCTATGTAGCTGCAAAAAAGATGCGGGAACTGCGTGTCAATTCAGCTGTGATTGTGGTGGGAACCAAAATTCAGGGGATACTCACTTCAAAGGACATCCTTATGCGTGTGGTGGCTCAAAATCTTTCTCCTGACTCGACTCCAATGGAAAAGGTAATGACTCCAAACCCAGAATGTGCATCACTAGAGACAACACTTCTTGATGCGCTCCATATGATGCATGATGGGAAGTTCTTACATCTTCCTGTGGTGGACAGAGATGGATCTGTTGCTGCGTGTGTGGATGTTTTGCTGATAACTCATGCTGCAATCTCTATGGTTGAAAGTAGCTCTGGAGCTGTTAATGATGTGGCAAACACTATTATGCAAAAATTTTGGGACTCAGCGCTTGCTCTGGATCCACCAGATGATTATGACACTCGGAGTGAAGTTTCTGGGGTGATGAATTCGGATGGGCCCGACACCACAAAGTCTACATATCAATCTGCCACTTTTGGAAATTCATTTTCTTTTAAATTTGAGGATCTCGATGGTCGAGTGCATCGAGTCAACTGTGGAGCTGAAAATTTAGATGAGCTTGTATCTTCTGTCACTCAAAGAATTGGTAATGTTAATGATGGAGAACGCCCAATCATTTTGTATGAGGATGATGAAGGCGACAAAGTTGTTATTACATCCGATAGCGATCTAGCTGTTGCTGTCGGTCATGCTCGATCAACAGGACTGAAGGCTTTAAAGTTGGAATTGGAGTTTGCTGAACCAGCCAAACCATCAACACCACAAACTCAAACTGCTACGGTCACTCATCTGAAGAAAACCGGCGCATTGTCTGCCCGTTCCAGTATTTTCGCAGGTGCTGTTGTTCTAACAAGCATTGGCGTGTTGGTCTACTTAAAGCGCTCCAAACAGTGA | 1626 | 0.4748 | MSAQAPPPSSVASTTRKSKRSSSSGSRKSLSDNGTNKPPSPNAPSQPSDGGDRTVKKLRLSKALTIPDGTTVSDACRRMAARRVDAVLLTDSNALLSGILTDKDVATRVIAEGLRTDQTPVSKVMTRNPIFVTSDTLAIEALQKMVQGKFRHLPVVENGEVIAMLDITKCLYDAISRMEKAAQQGSAIAAAVDGVEQRSNASAPNAFIETLRERMFKPSLSTIVGENTKVAIVSPSDTVYVAAKKMRELRVNSAVIVVGTKIQGILTSKDILMRVVAQNLSPDSTPMEKVMTPNPECASLETTLLDALHMMHDGKFLHLPVVDRDGSVAACVDVLLITHAAISMVESSSGAVNDVANTIMQKFWDSALALDPPDDYDTRSEVSGVMNSDGPDTTKSTYQSATFGNSFSFKFEDLDGRVHRVNCGAENLDELVSSVTQRIGNVNDGERPIILYEDDEGDKVVITSDSDLAVAVGHARSTGLKALKLELEFAEPAKPSTPQTQTATVTHLKKTGALSARSSIFAGAVVLTSIGVLVYLKRSKQ* | 542 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev08g2535 | 541 | CDD | CBS_pair_MUG70_2 | 227 | 343 | - | - | |
| Aev08g2535 | 541 | SMART | PB1_new | 406 | 490 | IPR000270 | GO:0005515 | |
| Aev08g2535 | 541 | ProSiteProfiles | CBS domain profile. | 291 | 347 | IPR000644 | - | |
| Aev08g2535 | 541 | ProSiteProfiles | CBS domain profile. | 59 | 116 | IPR000644 | - | |
| Aev08g2535 | 541 | Gene3D | - | 45 | 190 | IPR046342 | - | |
| Aev08g2535 | 541 | Pfam | CBS domain | 227 | 274 | IPR000644 | - | |
| Aev08g2535 | 541 | Pfam | CBS domain | 61 | 107 | IPR000644 | - | |
| Aev08g2535 | 541 | Pfam | CBS domain | 289 | 328 | IPR000644 | - | |
| Aev08g2535 | 541 | Pfam | CBS domain | 121 | 166 | IPR000644 | - | |
| Aev08g2535 | 541 | MobiDBLite | consensus disorder prediction | 381 | 397 | - | - | |
| Aev08g2535 | 541 | MobiDBLite | consensus disorder prediction | 378 | 397 | - | - | |
| Aev08g2535 | 541 | ProSiteProfiles | PB1 domain profile. | 404 | 490 | IPR000270 | GO:0005515 | |
| Aev08g2535 | 541 | SUPERFAMILY | CAD & PB1 domains | 394 | 495 | - | - | |
| Aev08g2535 | 541 | SUPERFAMILY | CBS-domain pair | 52 | 170 | IPR046342 | - | |
| Aev08g2535 | 541 | Gene3D | - | 217 | 361 | IPR046342 | - | |
| Aev08g2535 | 541 | SUPERFAMILY | CBS-domain pair | 228 | 335 | IPR046342 | - | |
| Aev08g2535 | 541 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
| Aev08g2535 | 541 | ProSiteProfiles | CBS domain profile. | 226 | 284 | IPR000644 | - | |
| Aev08g2535 | 541 | CDD | CBS_pair_MUG70_1 | 60 | 176 | - | - | |
| Aev08g2535 | 541 | SMART | cbs_1 | 62 | 110 | IPR000644 | - | |
| Aev08g2535 | 541 | SMART | cbs_1 | 294 | 342 | IPR000644 | - | |
| Aev08g2535 | 541 | SMART | cbs_1 | 128 | 172 | IPR000644 | - | |
| Aev08g2535 | 541 | SMART | cbs_1 | 229 | 276 | IPR000644 | - | |
| Aev08g2535 | 541 | Gene3D | - | 424 | 487 | - | - | |
| Aev08g2535 | 541 | ProSiteProfiles | CBS domain profile. | 125 | 180 | IPR000644 | - | |
| Aev08g2535 | 541 | PANTHER | CBS/OCTICOSAPEPTIDE/PHOX/BEMP1 (PB1) DOMAIN PROTEIN | 26 | 528 | - | - | |
| Aev08g2535 | 541 | Pfam | PB1 domain | 407 | 487 | IPR000270 | GO:0005515 | |
| Aev08g2535 | 541 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 26 | 528 | - | - | |
| Aev08g2535 | 541 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev08g2535 | Aev-Chr8 | 24091748 | 24096006 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev08g2535 | - | - | gmx:100809841 | 738.799 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aev03g3039 | 03 | 29317699 | 29320845 | Aev08g2535 | 08 | 24091748 | 24096006 | PCT |