Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1740 ATGTCTCAGACCCCACCTCAAACCCTCGATTCCGATGAGGTACCTCCCACGGCCGCCACCAATTCACCCGATTCCTCCTTCACCGAAACCCTCCTCCACCTCTCCTTCAACCAGGACTCCGGGTGCTTCGCCGCCGCCACCGACCGCGGCTTCCGCATTTACAACTGCGACCCCTTCCGTGAGATCTTCCGCCGCGACTTCGGCCCCGGTGGCGGCGTCGGCCTCGTCCACATGCTATTTCGCTGCAACATCCTCGCCTTCGTCGGCGGCGGCTCCGACCCCCGCTACCCTCCCAATAAGGTCATGATCTGGGACGACCACCAATCCCGCTGCATCGGAGAACTCTCGTTCCGCTCCGAGGTCAAGGGCGTCCGCCTCCGCCGCGACCGAATCGTCGTCGTCCTCGCCCACAAGATCTTCGTCTACAACTTCGCCGATCTCAAGGTTCTCCATCAAATCGAAACCATCGCGAACCCTAAGGGCCTCTGCGATCTTTCTCACGTCTCCGCCACGATGGTGTTGGCCTGCCCCGGGTTGCAGAAGGGGCAGGTTAGGGTTGAGCACTACGCCTCCAAGAGGACCAAGTTCATCATGGCGCATGATTCAAGAATCGCGTGTTTTGCACTCACGCACGATGGCAGGTTGCTCGCCACCGCTAGCTCCAAGGGCACCCTCATTAGGCTCTTCAATACCCTCGACGGTTCACTGCTCCAAGAGGTACGGAGGGGTGCAGACAGAGCAGAGATATACAGCCTTGCTTTTTCTCCTACTGCACAGTGGCTGGCTGTGTCAAGTGACAAGGGGACCGTTCATGTTTTCAACCTCAAGGTTGATTCCGGTGGCCTGTTGGGGCATGACAGATTGAATAGTACTTCTGAGGCAAATCCTTCTAGCCCCACCACCGCGGTTTCATCTCTTTCCTTTTTTAAAGGTGTGCTACCCAAGTACTTTAGCTCAGAGTGGTCTGTGGCTCAATTTCGCTTGCAAGAAGGTTTGCAATATGTTGTTGCATTTGGCCATCAAAAGAATACAATCGTAATACTAGGCATGGATGGCAGCTTCTACCGATGTCAGTTTGATTCTGCTAGCGGTGGAGAGATGACCCAACTTGAATATTACAATTTCCTAAAGGCAGAAGAGACATTCTAG 1149 0.5509 MSQTPPQTLDSDEVPPTAATNSPDSSFTETLLHLSFNQDSGCFAAATDRGFRIYNCDPFREIFRRDFGPGGGVGLVHMLFRCNILAFVGGGSDPRYPPNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLAHKIFVYNFADLKVLHQIETIANPKGLCDLSHVSATMVLACPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTHDGRLLATASSKGTLIRLFNTLDGSLLQEVRRGADRAEIYSLAFSPTAQWLAVSSDKGTVHVFNLKVDSGGLLGHDRLNSTSEANPSSPTTAVSSLSFFKGVLPKYFSSEWSVAQFRLQEGLQYVVAFGHQKNTIVILGMDGSFYRCQFDSASGGEMTQLEYYNFLKAEETF 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1740 382 SUPERFAMILY WD40 repeat-like 27 284 IPR036322 GO:0005515
Aed8g1740 382 SMART WD40_4 20 55 IPR001680 GO:0005515
Aed8g1740 382 SMART WD40_4 190 230 IPR001680 GO:0005515
Aed8g1740 382 SMART WD40_4 233 274 IPR001680 GO:0005515
Aed8g1740 382 MobiDBLite consensus disorder prediction 1 25 - -
Aed8g1740 382 Pfam WD domain, G-beta repeat 243 274 IPR001680 GO:0005515
Aed8g1740 382 Gene3D - 28 363 IPR015943 GO:0005515
Aed8g1740 382 PANTHER AUTOPHAGY-RELATED PROTEIN 18A-LIKE ISOFORM X1 21 382 - -
Aed8g1740 382 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 21 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1740 Aed-Chr8 22407738 22411241 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1740 K22991 - gmx:100787427 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2191 2 25762307 25766198 Aed8g1740 8 22407738 22411241 ECH
Aed8g1740 8 22407738 22411241 Aed8g1740 8 22407738 22411241 ECH
Aed4g0297 4 2151325 2154260 Aed8g1740 8 22407738 22411241 PCT