Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0297 ATGAGTTTGATTATTGATTACGTGGCAAAACAGGGGTGGTTGACTGATGGGGCAGTTCAGAGCGTTGATGTAGTAAATCGGTACCCCACTTCCCACCCCTCCTCTCTCCGCTCACAACCCGTTCAAAGGATTATCGCCATGTCAGTTGCACCAGTTGAGAGTATTCCCTCGTTAAGCAGTGATCTCTTCTATGATATATTTCGTCGACTTGATGGGGCAACATTGGCTAGTGCAGCATGTACTTGTGCAGCATTGTGTTCCATCTCAAAAGAAGAGAGTTTATGGGAGAACGTGTGTTCATCTATGTGGCCTTCAACCAATAGAGAGGATGTCAAAAGTTTAATATCTTCTGTTGGTGGATTCAGAAAATTCTATGCAGATTGTTTCCCGCTTATTGTAAACAAGGAGGTTGTAGAGTATCAACCGAACAACTATCTTGAGTACCCAGACAATTGGACTGAAGCTGAATATTATGGGGACATGGATGAATCTGAAAGCATCTCTGCATCAGATTTTGTTTCTATAGTAGATATTAGGTTCAAGGGGAAACCAATCTGTTCCAAAGTTCTCTGGGGAATTCCAAATGCAAATGGCTATGATGGTTGGTTCTATAACTGCCCTTTCCGGATTGATATTCTCACTTATGCAGATAGAGATGATAACAATGATGGAGCGGTTCACCTTTCTGTATCTGATGGTTTGCCACCAATTACATCCCTGGAGAGGGAAAGGAAAGACGGGAAGCTGTGGCGGGAGCTCCATGAAGGGCTCCAGCTTAGTTGGATTATAGTAAATAGGAAAATAAAACAAGCTGCAAATCTTGCTAGCTGGAGCCCCCTTGGTGGTCAAAGACACTGGCCAACAGATAAGGATTTCGTTATCCGCTTTGGATCAGTTCTACCTGCCAAGGACATTCTTCCTTGTCAGGTAGCGGAGTGTATCCTTATAATGAAGTTTAGAGTGGTTCACACCGAAGAAGAAGAAGGGGTTCACACAACTCTTAAATTAACAGAGCTGAGCATGCAACTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGAAACAGTTTGCATATACTTAAGGAATCACTTAGCAGCCGAAGGAGCAAAAATTATGGTGAAGTACTCGAGTCCTGTCATATGTATTCAAAAGTACAGAATGAGTTGAAAGAGGAGAAGATGAGGAACGAAAGTAGGTTGGATAGACTTTGTATTTTAAGTGGCATTGCGGCATTTATGACGTTCTGGTACTGTGTTTTATGA 1263 0.4252 MSLIIDYVAKQGWLTDGAVQSVDVVNRYPTSHPSSLRSQPVQRIIAMSVAPVESIPSLSSDLFYDIFRRLDGATLASAACTCAALCSISKEESLWENVCSSMWPSTNREDVKSLISSVGGFRKFYADCFPLIVNKEVVEYQPNNYLEYPDNWTEAEYYGDMDESESISASDFVSIVDIRFKGKPICSKVLWGIPNANGYDGWFYNCPFRIDILTYADRDDNNDGAVHLSVSDGLPPITSLERERKDGKLWRELHEGLQLSWIIVNRKIKQAANLASWSPLGGQRHWPTDKDFVIRFGSVLPAKDILPCQVAECILIMKFRVVHTEEEEGVHTTLKLTELSMQLEDMEGAHVNGRNSLHILKESLSSRRSKNYGEVLESCHMYSKVQNELKEEKMRNESRLDRLCILSGIAAFMTFWYCVL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0297 420 Gene3D - 45 140 - -
Aed4g0297 420 SUPERFAMILY F-box domain 52 125 IPR036047 GO:0005515
Aed4g0297 420 PANTHER F-BOX PROTEIN-RELATED 39 414 IPR045283 -
Aed4g0297 420 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN-RELATED 39 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0297 Aed-Chr4 2151325 2154260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0297 - - gmx:100779902 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0297 4 2151325 2154260 Aed4g0297 4 2151325 2154260 ECH
Aed4g0297 4 2151325 2154260 Aed8g1740 8 22407738 22411241 PCT