Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2191 ATGGCAACCCTTTCAGCATGCACCTCCCCTCCATGGCCAAACCCTAGCCCCAACACCACCTCCCCCAATTCAAACACAAACCCTGATTTCCTCCCCGACCAATCCCAAACCCTTGACTTCGACTCCCTCATGCCTCCGCAGCCCGAATCACCACCGCACCACCACCACTCCCCAACCGCCTCGCCGCCCGAATCCTCCCCGGCGCCGCCGCCTCCGTCGCTTCTCCACCTCTCATTCAACCAGGACCAGGCCTGCTTCGCCGCCGCTGCCGACAACGGCTTCCGCATCTACAATTGCGACCCCTTCCGCGAGCTCTTCCGCCGCGAGTTCGACGGAGGCGGAATCGGGCATGTGGAGATGCTCTTCCGCTGCAACATCCTCGCTCTCGTCGGCGGCGGGTCCCAGCCCCAGTACCCGCCAAACAAGGTCATGATCTGGGACGACCACCAGGGCCGCTGCATCGGCGAGCTCTCCTTCCGCGCCGCCGTTCGCGGCGTCTGCCTCCGCCGTGACCGAATAATCGTCGTCGTGGAACAGAAGATCTTCGTCTACAACTTCGTGGACCTCAAGCTCGTGCACCAGATTGAGACCGTTCCCAACCCTAAGGGGCTCTGCGCGGTTTCGCACGTGTCCGATTCTCTCGTTCTTGCGTGCCCTGGTTTGCACAAGGGTCAGATTCGCGTTGAGCACTACGCGCAGAAGAAGACCAAGTTCATTTCAGCGCATGATTCCAGAATCGCTTGCTTCGCTCTCACGCTTGATGGGCAATTAATCGCCACCGCCAGCACCAAGGGAACGCTGATTCGGATTTTCGACACGAATCATGGCACGCTTCTTCAGGAAGTGAGAAGGGGTGCGAATGCTGCTGAGATTCATAGTTTGGCATTCTCTTCTACTGCTCAGTGGCTAGCAGTCTCAAGTGACAAGGGTACTGTCCATGTATTCAGTCTTAAGGTTAATTCTAGCATCCCAGAGCAGGAAAAGTCACAGAGTTCATCCAATTCAGATGCTGCTGCTGCCATTACCCCATCTAACTCTAACTCATCTCGCTCTTTCATTAAATTTAAAGGAGTGTTGCCCAAGTATTTCAATTCTGAGTGGTCAGTTGCTCAGTTTCACTTACAAGAGGGCTCTCATTACACAGTTGCATTTGGTCTCCAAAAGAATACAGTCATTATTCTTGGCATGGATGGAAGCTTCTATAGATGCCAATTTGATCCAGTACATGGAGGGGAGATGACTCAGCTGGAATATCAAAACTTTTTAAAGCCAGAACCAGAAACAGCCTTGTGA 1293 0.5422 MATLSACTSPPWPNPSPNTTSPNSNTNPDFLPDQSQTLDFDSLMPPQPESPPHHHHSPTASPPESSPAPPPPSLLHLSFNQDQACFAAAADNGFRIYNCDPFRELFRREFDGGGIGHVEMLFRCNILALVGGGSQPQYPPNKVMIWDDHQGRCIGELSFRAAVRGVCLRRDRIIVVVEQKIFVYNFVDLKLVHQIETVPNPKGLCAVSHVSDSLVLACPGLHKGQIRVEHYAQKKTKFISAHDSRIACFALTLDGQLIATASTKGTLIRIFDTNHGTLLQEVRRGANAAEIHSLAFSSTAQWLAVSSDKGTVHVFSLKVNSSIPEQEKSQSSSNSDAAAAITPSNSNSSRSFIKFKGVLPKYFNSEWSVAQFHLQEGSHYTVAFGLQKNTVIILGMDGSFYRCQFDPVHGGEMTQLEYQNFLKPEPETAL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2191 430 MobiDBLite consensus disorder prediction 45 74 - -
Aed2g2191 430 SUPERFAMILY WD40 repeat-like 69 324 IPR036322 GO:0005515
Aed2g2191 430 MobiDBLite consensus disorder prediction 19 43 - -
Aed2g2191 430 MobiDBLite consensus disorder prediction 325 346 - -
Aed2g2191 430 MobiDBLite consensus disorder prediction 1 74 - -
Aed2g2191 430 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 26 426 - -
Aed2g2191 430 PANTHER WD REPEAT PHOSPHOINOSITIDE-INTERACTING-LIKE PROTEIN 26 426 - -
Aed2g2191 430 Gene3D - 72 407 IPR015943 GO:0005515
Aed2g2191 430 SMART WD40_4 150 185 IPR001680 GO:0005515
Aed2g2191 430 SMART WD40_4 48 98 IPR001680 GO:0005515
Aed2g2191 430 SMART WD40_4 232 272 IPR001680 GO:0005515
Aed2g2191 430 SMART WD40_4 275 316 IPR001680 GO:0005515
Aed2g2191 430 Pfam WD domain, G-beta repeat 285 315 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2191 Aed-Chr2 25762307 25766198 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2191 K22991 - gmx:100781692 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2191 2 25762307 25766198 Aed8g1740 8 22407738 22411241 ECH
Aed2g2191 2 25762307 25766198 Aed2g2191 2 25762307 25766198 ECH