Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2395 ATGTCAATGAGTGAGCGGAAGACTATTGACCTAGAACAGGGATGGGATTTCATGCTGACGGGCATCACCAAGCTCAAGAACATTCTCGAAGGCTTGCCCGAGCCTCAATTCAGCTCCGAGGACTACATGATGCTTTATACGACCATCTACAATATGTGCACTCAAAAGCCTCCTCATGACTATTCCCAACAGCTTTACGACAAGTATAAGGAGTCTTTTGAAGAGTACATCGTATCGACGGTATTGCCTTCTTTGAGAGAGAAGCATGATGAATTTATGTTGAGAGAACTTGTGAAGAGATGGGCAAACCATAAAATTATGGTTCGGTGGCTTTCTCGGTTCTTTTACTATTTGGATCGGTACTTTATTGCTCGGAGGTCACTTCCACCTCTTAATGAAGTTGGGTTGACTTGTTTCCGTGATTTGGTATACAAGGAACTAAATGGGAAAGTTAGAGATGCAGTTATTTCACTTATTGATCAAGAACGGGAGGGAGAGCAGATTGATCGAGCTCTATTAAAGAATGTATTAGACATATTTGTTGAAATTGGAATGGGGCAAATGGATCACTATGAGAATGATTTTGAGGCTGCCATGCTCAAAGACACTTCTGCTTATTATTCTCGAAAGGCTTCAAATTGGATCCTAGAAGATTCTTGTCCTGATTATATGCTCAAGGTGTGGTTTCTCATTTATGCTTACTATAACTTGGTTACTTCATTTACATTACTTTCTGGCCCCTATTTGATCTTCTGTCTTCTATTACAGGCTGAGGAGTGCTTAAAACGGGAGAAAGATAGGGTTGCTCATTACTTGCACTCTAGTAGCGAGCCAAAGTTATTAGAGAAAGTTCAACATGAGTTGTTATCTGTGTATGCAAGCCAACTCCTTGAGAAAGAGCACTCTGGATGTCATGCTTTACTTAGAGATGACAAGGTTGAAGACTTGTCAAGAATGTTCAGGCTATTCTCTAAAATACCTCGAGGCTTAGATCCTGTTTCCAGTATATTTAAGCAGCATGTTACCGATGAAGGTATGGCTTTGGTGAATCAGGCTGAAGATGCAGCTAGCAACAAAAAGGCAGAAAAAAAGGATATTGTTGGTCTGCAGGAGCAGGTTTTTGTTCGGAAGGTGATTGAGCTGCATGACAAGTACCTGGCATATGTGAATGATTGTTTCCAGAATCATACGCTTTTCCACAAGGCTCTTAAAGAGGCTTTTGAGGTCTTTTGCAACAAAGGTGTTTCTGGAAGTTCAAATGCAGAACTGCTTGCTTCCTTCTGTGATAACATTCTTAAGAAAGGAGGAAGTGAAAAATTAAGCGATGAAGCAATCGAAGAAACTCTTGAAAAGGTCTGCATTATTCTTGATGTTCAACATGTTAGAATATATATTATCTTTATATTATCTTGGTAG 1416 0.399 MSMSERKTIDLEQGWDFMLTGITKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYKESFEEYIVSTVLPSLREKHDEFMLRELVKRWANHKIMVRWLSRFFYYLDRYFIARRSLPPLNEVGLTCFRDLVYKELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDHYENDFEAAMLKDTSAYYSRKASNWILEDSCPDYMLKVWFLIYAYYNLVTSFTLLSGPYLIFCLLLQAEECLKREKDRVAHYLHSSSEPKLLEKVQHELLSVYASQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSSIFKQHVTDEGMALVNQAEDAASNKKAEKKDIVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFEVFCNKGVSGSSNAELLASFCDNILKKGGSEKLSDEAIEETLEKVCIILDVQHVRIYIIFILSW 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2395 471 Pfam Cullin family 24 227 IPR001373 GO:0006511|GO:0031625
Aed6g2395 471 Pfam Cullin family 254 457 IPR001373 GO:0006511|GO:0031625
Aed6g2395 471 PANTHER CULLIN 3B 2 227 - -
Aed6g2395 471 SUPERFAMILY Cullin repeat-like 254 414 IPR016159 -
Aed6g2395 471 Gene3D Cullin Repeats 420 462 - -
Aed6g2395 471 Gene3D Cullin Repeats 4 141 - -
Aed6g2395 471 PANTHER CULLIN 2 227 IPR045093 -
Aed6g2395 471 SUPERFAMILY Cullin repeat-like 11 239 IPR016159 -
Aed6g2395 471 Gene3D Cullin Repeats 297 419 - -
Aed6g2395 471 PANTHER CULLIN 253 456 IPR045093 -
Aed6g2395 471 Coils Coil 352 372 - -
Aed6g2395 471 Gene3D Cullin Repeats 142 293 - -
Aed6g2395 471 PANTHER CULLIN 3B 253 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2395 Aed-Chr6 25573337 25580286 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2395 K03347 - gmx:100786561 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2395 6 25573337 25580286 Aed6g2395 6 25573337 25580286 ECH
Aed6g2395 6 25573337 25580286 Aed4g0733 4 6104638 6113181 PCT
Aed9g0366 9 2525392 2534421 Aed6g2395 6 25573337 25580286 PCT