Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0733 ATGTCCATGAGTGAGCGCAAGACTATTGACCTAGAGCAAGGATGGGACTTTATGCAGAAGGGCATTCTGAAGCTGAAGAAAATTCTAGAAGGGCTTCCCGAGCCCCAGTTCAGCTCGGAGGAGTACATGATGCTCTACACGACCATATATAATATGTGCACTCAGAAGCCTCCTCATGACTATTCCCAACAACTTTATGACAAGTACAGGGAATCGTTTGAAGAGTACATCGTATCAACGGTATTACCTTCTTTGAGAGAGAAGCATGATGAATTTATGTTAAGAGAACTTGTGAAAAGGTGGGCAAACCATAAAATTATGGTTAGGTGGCTTTCCCGTTTCTTTTACTACTTGGATCGCTACTTTATTGCCCGGAGGTCACTTCCACCACTAAATGAAGTTGGGTTGACGTGCTTCCGTGATTTGGTTTACAAGGAGCTAAACGGGAAAGTGAGAGATGCAGTGATTTCCCTTATTGATCAAGAACGTGAAGGAGAGCAGATTGACCGAGCTCTATTGAAGAATGTATTAGATATATTTGTTGAAATTGGAATGGGGCAAATGGATCACTATGAGAATGATTTTGAAGCTGCCATGCTGAAAGACACTTCTGCTTATTATTCTCGAAAGGCTTCAAACTGGATCCTAGAAGATTCTTGTCCTGACTATATGCTCAAGGCTGAGGAGTGCTTAAAACGGGAGAAAGATAGGGTTGCCCATTACTTGCACTCTAGCAGTGAGCCAAAGTTATTGGAGAAAGTTCAACATGAACTGCTATCTGTATATGCGGGCCAACTTCTTGACAAGGAGCATTCTGGATGTCATGCATTACTTAGAGACGACAAGGTTGAAGACTTGTCAAGGATGTTCAGGCTCTTTTCTAAAATACCCCGAGGTTTAGATCCAGTTTCCTCTATATTTAAACAGCATGTGACTTCTGAAGGCATGGCATTAGTCAAGTTGGCTGAAGATGCAGTGAGTACCAAAAAGGCGGAGAAAAAGGATATTGTTGGTTTACAGGAGCAGGTTTTTGTTCGGAAGGTGATTGAGCTGCATGATAAGTACCTGGCATACGTGAATGATTGTTTCCAAAATCATACACTTTTCCACAAGGCTCTTAAGGAGGCTTTTGAGATCTTCTGCAACAAGGGTGTCGCTGGAAGCTCAAGTGCAGAACTGCTTGCCACTTTTTGTGACAATATTCTTAAGAAAGGAGGAAGTGAAAAATTGAGTGATGAAGCAATTGAAGAAACTCTTGAAAAGGTTGTCAAGTTGCTTGCCTATATTAGCGACAAAGATTTGTTTGCTGAATTTTATAGGAAGAAGCTTGCTCGAAGGCTCCTTTTTGACAAGAGTGCCAATGATGATCACGAGAGAAGTATTTTGACAAAACTAAAGCAACAATGTGGTGGCCAATTTACCTCGAAGATGGAAGGAATGGCTTCAGCATTGCTTCTATTTAATTCCTCAGATAGACTGAGTTATTCGGAGATAATGACTCAGTTAAACTTATCTGATGACGATGTTATTAGACTGCTCCACTCCTTGTCATGTGCCAAGTACAAGATTCTTAACAAGGAACCAAACACAAAAACAATATCTTCTACCGACTATTTTGAATTTAATTCAAAATTTACAGACAAAATGAGGAGAATCAAGATTCCTCTTCCTCCTGTTGATGAGAAGAAAAAACCTGATGTCAAGGCAATTAAGAAGCGGATTGAAGATTTGATTTCTCGAGACTACTTGGAGAGAGACAAAGATAACGCAAATTTGTTCAAGTACTTGGCGTGA 1794 0.4052 MSMSERKTIDLEQGWDFMQKGILKLKKILEGLPEPQFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYIVSTVLPSLREKHDEFMLRELVKRWANHKIMVRWLSRFFYYLDRYFIARRSLPPLNEVGLTCFRDLVYKELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDHYENDFEAAMLKDTSAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVAHYLHSSSEPKLLEKVQHELLSVYAGQLLDKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSSIFKQHVTSEGMALVKLAEDAVSTKKAEKKDIVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFEIFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMASALLLFNSSDRLSYSEIMTQLNLSDDDVIRLLHSLSCAKYKILNKEPNTKTISSTDYFEFNSKFTDKMRRIKIPLPPVDEKKKPDVKAIKKRIEDLISRDYLERDKDNANLFKYLA 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0733 597 Gene3D - 545 597 IPR036388 -
Aed4g0733 597 PANTHER CULLIN 481 564 IPR045093 -
Aed4g0733 597 PANTHER CULLIN 2 481 IPR045093 -
Aed4g0733 597 ProSiteProfiles Cullin family profile. 389 480 IPR016158 -
Aed4g0733 597 Gene3D Cullin Repeats 3 141 - -
Aed4g0733 597 Gene3D Cullin Repeats 390 501 - -
Aed4g0733 597 SMART cul_2 420 525 IPR016158 -
Aed4g0733 597 Gene3D Cullin Repeats 142 261 - -
Aed4g0733 597 PANTHER CULLIN 568 596 IPR045093 -
Aed4g0733 597 SUPERFAMILY "Winged helix" DNA-binding domain 562 597 IPR036390 -
Aed4g0733 597 SUPERFAMILY Cullin homology domain 390 558 IPR036317 -
Aed4g0733 597 SUPERFAMILY Cullin repeat-like 11 385 IPR016159 -
Aed4g0733 597 PANTHER CULLIN 3B 568 596 - -
Aed4g0733 597 PANTHER CULLIN 3B 481 564 - -
Aed4g0733 597 PANTHER CULLIN 3B 2 481 - -
Aed4g0733 597 Gene3D Cullin Repeats 267 389 - -
Aed4g0733 597 Pfam Cullin family 26 481 IPR001373 GO:0006511|GO:0031625
Aed4g0733 597 Pfam Cullin family 483 545 IPR001373 GO:0006511|GO:0031625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0733 Aed-Chr4 6104638 6113181 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0733 K03347 - gmx:100784626 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0733 4 6104638 6113181 Aed4g0733 4 6104638 6113181 ECH
Aed6g2395 6 25573337 25580286 Aed4g0733 4 6104638 6113181 PCT